Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_J13
         (819 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0107 + 14504065-14504448,14504545-14504922,14506011-145066...    52   4e-07
02_05_1119 - 34248772-34249989                                         31   1.5  
01_01_0575 - 4271910-4272371,4272923-4272928,4272999-4273174,427...    29   5.9  
08_01_0606 - 5321751-5321819,5321950-5322192,5322279-5322377,532...    28   7.8  

>03_03_0107 +
           14504065-14504448,14504545-14504922,14506011-14506619,
           14507110-14507237,14507829-14507832
          Length = 500

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
 Frame = -3

Query: 535 EEDVVTVEV--EPKERWDCGTILSTYSNLYNHPKLIEEPKKPK-RI--VIDPKTGIPKDV 371
           EE+VV V    +  E WDC TI+STYSNL NHP  I+ P  PK R+  V   +T   KD+
Sbjct: 344 EEEVVLVSESSDESEVWDCETIVSTYSNLDNHPGKIQTPGNPKNRLPKVFPGETATTKDI 403

Query: 370 LGTDG-GRLTVKAL 332
           +   G  RL V+ L
Sbjct: 404 IRLQGKERLPVEYL 417


>02_05_1119 - 34248772-34249989
          Length = 405

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 407 DPLRFLRFLYEFRMVVQVGVGAEDCPAVPSLLGLNFHGDDI 529
           D LR LR L +    V+   G +D PA+ +LL L+   DD+
Sbjct: 6   DFLRVLRALRDAARRVEAAAGGDDGPALHALLALDASADDL 46


>01_01_0575 -
           4271910-4272371,4272923-4272928,4272999-4273174,
           4274150-4275299
          Length = 597

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 713 DDTEXGALDPDEIEGHMPETHAMLLQAAQEFEASQRKYKLDKE 585
           ++ E    DP+E+E    E  A +  AA+  E  +RK + DK+
Sbjct: 276 EEVEKEEEDPEEVEKEGGEAEAKVANAAKTGEVEKRKVEEDKK 318


>08_01_0606 -
           5321751-5321819,5321950-5322192,5322279-5322377,
           5322463-5322942,5323069-5323167,5323306-5323427,
           5323517-5323635,5323734-5323801,5323889-5324074,
           5324169-5324244,5324339-5324418,5324505-5324561,
           5324980-5325122,5325208-5325352,5325652-5325813,
           5325893-5326078,5326263-5326355,5326437-5326597,
           5327005-5327109,5328263-5328278
          Length = 902

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 445 PKLIEEPKKPKRIVIDPKTGIP 380
           PKL E P KP R+++   TG+P
Sbjct: 79  PKLAEIPFKPARVLLQDFTGVP 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,290,894
Number of Sequences: 37544
Number of extensions: 239717
Number of successful extensions: 768
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)