Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_J13
         (819 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009855-1|AAH09855.1|  475|Homo sapiens LTV1 homolog (S. cerevi...    78   3e-14
AL049844-1|CAI21442.1|  475|Homo sapiens LTV1 homolog (S. cerevi...    78   3e-14
AK027815-1|BAB55388.1|  299|Homo sapiens protein ( Homo sapiens ...    78   3e-14

>BC009855-1|AAH09855.1|  475|Homo sapiens LTV1 homolog (S.
           cerevisiae) protein.
          Length = 475

 Score = 78.2 bits (184), Expect = 3e-14
 Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
 Frame = -3

Query: 544 KNSEEDVVTVEVEP-KERWDCGTILSTYSNLYNHPKLIEEPKKPKRIVIDPKTGIPKDVL 368
           ++ EE+++TV +E  KE+WDC +I STYSNLYNHP+LI+   KPK+I I  KTGIP +VL
Sbjct: 330 ESEEEEMITVVLEEAKEKWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVL 389

Query: 367 GTDGGRLTVKALAR 326
              G  LT K   R
Sbjct: 390 PKKG--LTAKQTER 401



 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -2

Query: 743 DNRFERL-RRYDDTEXGALDPDEIEG 669
           D RFE+   +YDD E GALD  E+EG
Sbjct: 260 DERFEKFYEQYDDDEIGALDNAELEG 285


>AL049844-1|CAI21442.1|  475|Homo sapiens LTV1 homolog (S.
           cerevisiae) protein.
          Length = 475

 Score = 78.2 bits (184), Expect = 3e-14
 Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
 Frame = -3

Query: 544 KNSEEDVVTVEVEP-KERWDCGTILSTYSNLYNHPKLIEEPKKPKRIVIDPKTGIPKDVL 368
           ++ EE+++TV +E  KE+WDC +I STYSNLYNHP+LI+   KPK+I I  KTGIP +VL
Sbjct: 330 ESEEEEMITVVLEEAKEKWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVL 389

Query: 367 GTDGGRLTVKALAR 326
              G  LT K   R
Sbjct: 390 PKKG--LTAKQTER 401



 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -2

Query: 743 DNRFERL-RRYDDTEXGALDPDEIEG 669
           D RFE+   +YDD E GALD  E+EG
Sbjct: 260 DERFEKFYEQYDDDEIGALDNAELEG 285


>AK027815-1|BAB55388.1|  299|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14909 fis, clone PLACE1006037. ).
          Length = 299

 Score = 78.2 bits (184), Expect = 3e-14
 Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
 Frame = -3

Query: 544 KNSEEDVVTVEVEP-KERWDCGTILSTYSNLYNHPKLIEEPKKPKRIVIDPKTGIPKDVL 368
           ++ EE+++TV +E  KE+WDC +I STYSNLYNHP+LI+   KPK+I I  KTGIP +VL
Sbjct: 154 ESEEEEMITVVLEEAKEKWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVL 213

Query: 367 GTDGGRLTVKALAR 326
              G  LT K   R
Sbjct: 214 PKKG--LTAKQTER 225



 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -2

Query: 743 DNRFERL-RRYDDTEXGALDPDEIEG 669
           D RFE+   +YDD E GALD  E+EG
Sbjct: 84  DERFEKFYEQYDDDEIGALDNAELEG 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,755,662
Number of Sequences: 237096
Number of extensions: 1275564
Number of successful extensions: 4132
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4132
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)