Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_J13
         (819 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132172-1|AAD34760.1|  493|Drosophila melanogaster unknown prot...    79   5e-15
AE013599-1184|AAF58742.1|  493|Drosophila melanogaster CG7686-PA...    79   5e-15

>AF132172-1|AAD34760.1|  493|Drosophila melanogaster unknown
           protein.
          Length = 493

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 12/87 (13%)
 Frame = -3

Query: 553 KSKKNSEEDVVTVEVE-PKER-WDCGTILSTYSNLYNHPKLIEEPKKPKR---------I 407
           + +++  E++V  EV+ PK++ WDC +ILSTYSN+YNHPK+I+EP++ +R         I
Sbjct: 319 EGEEDPTEELVEYEVDDPKQKKWDCESILSTYSNIYNHPKVIDEPRRSRRSSASTNPAPI 378

Query: 406 VIDPKTGIPKDVL-GTDGGRLTVKALA 329
            IDPKTG+P +VL G   G+LT KALA
Sbjct: 379 QIDPKTGLPTNVLRGGVDGQLTAKALA 405



 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = -2

Query: 743 DNRFERL-RRYDDTEXGALDPDEIEGHMPETHAMLLQAAQEFEASQRKYKLDKE 585
           D+RFE+    YDD E G L  ++IEG+  + H +++Q  QEF+   +  + +KE
Sbjct: 252 DDRFEKFYATYDDPELGDLALEDIEGNWHQKHPVVMQCFQEFKKKDKGIEYNKE 305


>AE013599-1184|AAF58742.1|  493|Drosophila melanogaster CG7686-PA
           protein.
          Length = 493

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 12/87 (13%)
 Frame = -3

Query: 553 KSKKNSEEDVVTVEVE-PKER-WDCGTILSTYSNLYNHPKLIEEPKKPKR---------I 407
           + +++  E++V  EV+ PK++ WDC +ILSTYSN+YNHPK+I+EP++ +R         I
Sbjct: 319 EGEEDPTEELVEYEVDDPKQKKWDCESILSTYSNIYNHPKVIDEPRRSRRSSASTNPAPI 378

Query: 406 VIDPKTGIPKDVL-GTDGGRLTVKALA 329
            IDPKTG+P +VL G   G+LT KALA
Sbjct: 379 QIDPKTGLPTNVLRGGVDGQLTAKALA 405



 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = -2

Query: 743 DNRFERL-RRYDDTEXGALDPDEIEGHMPETHAMLLQAAQEFEASQRKYKLDKE 585
           D+RFE+    YDD E G L  ++IEG+  + H +++Q  QEF+   +  + +KE
Sbjct: 252 DDRFEKFYATYDDPELGDLALEDIEGNWHQKHPVVMQCFQEFKKKDKGIEYNKE 305


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,697,327
Number of Sequences: 53049
Number of extensions: 397232
Number of successful extensions: 1342
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)