Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_J12
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0365 - 28309587-28310132                                         29   4.8  
11_06_0510 + 24420402-24422582                                         29   6.3  

>02_05_0365 - 28309587-28310132
          Length = 181

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = -2

Query: 423 ALRPPVDLSYETKISSLSLR-PPLQAHRQALPVSAAKTK 310
           +LRP   LS+   I+ L+L  PP+ ++R +L V AA T+
Sbjct: 22  SLRPSPPLSWSASIAHLALSPPPVPSNRASLVVRAAWTR 60


>11_06_0510 + 24420402-24422582
          Length = 726

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/61 (19%), Positives = 28/61 (45%)
 Frame = -2

Query: 639 LYRLFRVVQKLGGYNRVTNQNQWKLLLTKWAFIR*RIV*RISANRHIKNSCTASKISTES 460
           L++  ++V++L     +T + +W+L+   W  +      + S N H +      ++ T  
Sbjct: 634 LFQACKLVRQLNELEGITEERRWRLIAGVWVEMLCYAAGKCSGNAHARQLSQGGEMLTVV 693

Query: 459 W 457
           W
Sbjct: 694 W 694


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,882,289
Number of Sequences: 37544
Number of extensions: 336382
Number of successful extensions: 892
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)