Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_J12
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr...    30   2.4  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AL021180-1|CAA15980.1|  383|Caenorhabditis elegans Hypothetical ...    29   5.7  
AF303252-1|AAG50210.1|  383|Caenorhabditis elegans 3E324 protein.      29   5.7  
U39645-2|AAA80365.2|  638|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
           protein ZK593.4 protein.
          Length = 1477

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 639 LYRLFRVVQKLGGYNRVTNQNQWK 568
           LYRL R+VQ  GG   V    +W+
Sbjct: 155 LYRLHRIVQNFGGCEEVNEDEKWR 178


>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
           protein C08B11.3 protein.
          Length = 1244

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = -2

Query: 765 DDSSDDEPKRRKRS-FRGSTV*VYG*PWHTAQSESDYSQQRY*LYRLFRVVQKLGGYNRV 589
           D  +D   K+RK + F  S    Y   W+              LYRL+  V  LGG+ +V
Sbjct: 15  DKLTDPPEKQRKMAEFYNSLRMFYKRRWNATLKLPHVQGVEVNLYRLYDTVMALGGWQKV 74

Query: 588 TNQNQW 571
              ++W
Sbjct: 75  AASDKW 80


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 657 SQQRY*LYRLFRVVQKLGGYNRVTNQNQWKLLLTK 553
           S+Q   L+RL+  V+  GG+ +VT    WK L T+
Sbjct: 327 SKQSIDLHRLYIGVRAKGGFQQVTKDKYWKNLCTE 361


>AL021180-1|CAA15980.1|  383|Caenorhabditis elegans Hypothetical
           protein Y44F5A.1 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 780 PXNTSDDSSDDEPKRRKR 727
           P N SD   DDEPK +KR
Sbjct: 339 PKNDSDSDDDDEPKSKKR 356


>AF303252-1|AAG50210.1|  383|Caenorhabditis elegans 3E324 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 780 PXNTSDDSSDDEPKRRKR 727
           P N SD   DDEPK +KR
Sbjct: 339 PKNDSDSDDDDEPKSKKR 356


>U39645-2|AAA80365.2|  638|Caenorhabditis elegans Hypothetical
           protein C14F11.2 protein.
          Length = 638

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 613 KTRRLQQGH*SKSMETTADKMGFHPVTNSITNLCKQAYK 497
           KT ++      +S E  A K+   P+T+S+TNL K   +
Sbjct: 472 KTTKIASAISRRSEEPAAQKIASKPITSSVTNLNKSGLR 510


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,900,336
Number of Sequences: 27780
Number of extensions: 281975
Number of successful extensions: 832
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)