Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_J12
         (865 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   4.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   8.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   8.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   8.4  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    22   8.4  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 602  PPSF*TTRNSLYNQYLCWL*SDSD 673
            P  F + R  LY+ Y+C+  +D D
Sbjct: 1055 PACFDSDRERLYDCYVCYSPNDED 1078


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 493 IFYMPVCRDSLYYSSPDE 546
           ++Y PV   SLYY + ++
Sbjct: 265 LYYSPVASTSLYYVNTEQ 282


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 493 IFYMPVCRDSLYYSSPDE 546
           ++Y PV   SLYY + ++
Sbjct: 265 LYYSPVASTSLYYVNTEQ 282


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 493 IFYMPVCRDSLYYSSPDE 546
           ++Y PV   SLYY + ++
Sbjct: 265 LYYSPVASTSLYYVNTEQ 282


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 484 SFEDFYRKLGVTLVAHPRGARTPP 413
           +F+DF + LGV ++    G+   P
Sbjct: 16  NFDDFMKALGVGIMTRKVGSSVSP 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,728
Number of Sequences: 438
Number of extensions: 3597
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)