Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_J10
(783 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 114 1e-26
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 107 2e-24
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 46 8e-06
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 40 4e-04
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 36 0.009
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 34 0.020
SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster... 31 0.14
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 27 2.3
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 27 4.0
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 26 5.3
SPAC869.10c |||proline specific permease |Schizosaccharomyces po... 26 5.3
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 26 7.0
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 25 9.3
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 25 9.3
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 114 bits (275), Expect = 1e-26
Identities = 53/106 (50%), Positives = 74/106 (69%)
Frame = -2
Query: 716 CRSNEYQLNDSXKYFLDDLDPLGAKDYQPTEQDILRTRVKTTGIVEVHFSFKNLNFKLFD 537
C +N L D+ Y+ D +D + Y P++QDIL R+KTTGI E F +++ FD
Sbjct: 182 CGTN-LSLLDNFYYYQDHIDRIFDPQYIPSDQDILHCRIKTTGISEETFLLNRHHYRFFD 240
Query: 536 VGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQES 399
VGGQRSER+KWIHCFE+VTA++F V+++ YDQ L ED + N+MQE+
Sbjct: 241 VGGQRSERRKWIHCFENVTALLFLVSLAGYDQCLVEDNSGNQMQEA 286
Score = 89.0 bits (211), Expect = 7e-19
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 18/135 (13%)
Frame = -3
Query: 442 RCCTRMKQRTVCRRVLKLFDSICNNKWFTDTSIILFLNKKDLFEEKIRRSPLTICFPEYT 263
+C + L L+DSICN+ WF+++++ILFLNK DLF+ K+ SP+ FP+Y
Sbjct: 272 QCLVEDNSGNQMQEALLLWDSICNSSWFSESAMILFLNKLDLFKRKVHISPIQKHFPDY- 330
Query: 262 GAQEYGEAAAYIQAQ------------------FEAKNKSTTKEIYCHMTCATDTNNIQF 137
QE G ++Q Q FE+ N+ ++ YCH T ATDT+ +Q
Sbjct: 331 --QEVGSTPTFVQTQCPLADNAVRSGMYYFYLKFESLNRIASRSCYCHFTTATDTSLLQR 388
Query: 136 VFDAVTDVIIANNLR 92
V +V D I++NNL+
Sbjct: 389 VMVSVQDTIMSNNLQ 403
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 107 bits (257), Expect = 2e-24
Identities = 50/105 (47%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Frame = -2
Query: 707 NEYQLNDSXKYFLDDLDPLGAKDYQPTEQDILRTRVKTTGIVEVHFSFKNLNFKLFDVGG 528
N+ L DS YF D + ++ Y PT DILR+R T GI E+ F+ +L ++FDVGG
Sbjct: 142 NDSVLIDSAPYFFSRADEICSRHYVPTIDDILRSRNSTLGISEISFTLDHLQIRMFDVGG 201
Query: 527 QRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDET--TNRMQES 399
QR+ER+KWI+CFE+V +IIFCV++++YD+ L+E NR+ ES
Sbjct: 202 QRTERRKWIYCFENVNSIIFCVSLNDYDKKLYERAAPERNRLVES 246
Score = 89.4 bits (212), Expect = 5e-19
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = -3
Query: 397 LKLFDSICNNKWFTDTSIILFLNKKDLFEEKIRRSPLTICFPEYTGAQEYGEAAAYIQAQ 218
+ LFDSI N++WF +SIILFLNK DLF +K+ P FP+Y G YI
Sbjct: 247 ISLFDSIINSQWFMHSSIILFLNKFDLFRKKLEHVPFQDYFPQYEGKNSVKSITRYILWL 306
Query: 217 FEAKNKSTTK-EIYCHMTCATDTNNIQFVFDAVTDVIIANNLRGCGLY 77
F + + K IY H+T A DT+NI+ VF AV + I+ ++L+ G++
Sbjct: 307 FVNPSINRAKHNIYPHITTAVDTSNIKVVFSAVKETILQHSLKEAGMF 354
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 45.6 bits (103), Expect = 8e-06
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = -2
Query: 608 TRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHE 429
T + T G ++N++F ++DVGGQ R W H F++ IIF V ++ +++
Sbjct: 44 TTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEA 103
Query: 428 DETTNRM 408
E RM
Sbjct: 104 HEELQRM 110
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -2
Query: 602 VKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDE 423
+ T G ++KN+ F ++DVGGQ R W H F +IF V ++ +++ +
Sbjct: 50 IPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQ 109
Query: 422 TTNRM 408
+R+
Sbjct: 110 ELHRI 114
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 35.5 bits (78), Expect = 0.009
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = -2
Query: 563 KNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQE 402
+ L F ++D+GGQ++ R W + FE AII+ V D L +E N +QE
Sbjct: 58 EGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVV--DSLDD-LRLEECRNTLQE 108
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 34.3 bits (75), Expect = 0.020
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -2
Query: 560 NLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQV 438
N+ F FD+GG + R+ W F +V I++ V +++++
Sbjct: 63 NVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERL 103
>SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 31.5 bits (68), Expect = 0.14
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 133 TQTGCCSCR-WRTSCGSRSPSWWTC-SSLRTAPGCTRPPR 246
T+TGC +CR R C R P + C S R G T PR
Sbjct: 42 TKTGCLTCRKRRIKCDERKPICYNCIKSKRQCEGYTHFPR 81
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -2
Query: 569 SFKNLNFKLFD 537
SFKNLNFKLFD
Sbjct: 553 SFKNLNFKLFD 563
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -2
Query: 452 EYDQVLHEDETTNRMQESSKVVRFYLQQQMVHRHQHH 342
E D V H D + E K+ +L+ + H+ HH
Sbjct: 39 ETDDVKHTDTHHSSKHELKKLKSHFLKDTLKHKRNHH 75
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 170 DVRHRHEQHPVCVRRGDRRDH 108
D +RH+Q +CV DRR H
Sbjct: 513 DALNRHKQRNICVGGVDRRQH 533
>SPAC869.10c |||proline specific permease |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 552
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 423 FILVQHLIIFRHGNTEYDRGHVLEAMNPFL 512
FIL L+IF G TE R ++ +A + F+
Sbjct: 251 FILAPELVIFSAGETEAPRRNIPKATSRFI 280
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 212 SEEQVHHEGDLLPHDVRHRHEQH 144
S++ +HHEG H H H H
Sbjct: 290 SDKDLHHEGHHHHHHHHHHHHSH 312
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 25.4 bits (53), Expect = 9.3
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 81 RPQPRRLLAMITSVTASNTNWMLFVSVAHVMWQ*ISFVVDLFFASNCAWMYAAAS 245
R QP+R A+ VTA N W F V+ + S + + F++ + +A S
Sbjct: 7 RLQPQRFAALPNPVTAENKFWRSF--KVPVVAKEYSAITSIHFSAESPYDFAVTS 59
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 25.4 bits (53), Expect = 9.3
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = -2
Query: 611 RTRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLH 432
+T++K G ++VH S + N VG +I CFED T I + + E+ ++
Sbjct: 80 KTKLKLFGEIKVHQSMSHPNI----VG--------FIDCFEDSTNIYLILELCEHKSLM- 126
Query: 431 EDETTNRMQESSKVVRFYLQQ 369
+ R Q + VR+ + Q
Sbjct: 127 -ELLRKRKQLTEPEVRYLMMQ 146
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,052,979
Number of Sequences: 5004
Number of extensions: 62746
Number of successful extensions: 207
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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