Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_J10
         (783 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   1.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.6  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.8  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -3

Query: 349 SIILFLNKKDLFEEK--IRRSPLTICFPEYTGAQ 254
           +++ F+NK D +EE   +   PL I   +Y G +
Sbjct: 80  NVLYFINKNDKYEENTILTTMPLLINVVKYLGGK 113


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -2

Query: 197 HHEGDLLPHDVRHRHEQHPVCVRRGDRRDHRQQPARLRP 81
           +H   L    V+  H  +    ++  R+  RQ+  RLRP
Sbjct: 146 NHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQEERRLRP 184


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 429 LVQHLIIFRHGNTEYDRGHVLEAMNPFL 512
           L Q  +IFRHG+   D  + +   +P+L
Sbjct: 2   LKQINVIFRHGDRIPDEKNEMYPKDPYL 29


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 429 LVQHLIIFRHGNTEYDRGHVLEAMNPFL 512
           L Q  +IFRHG+   D  + +   +P+L
Sbjct: 17  LKQINVIFRHGDRIPDEKNEMYPKDPYL 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,780
Number of Sequences: 438
Number of extensions: 4623
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)