Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_J07
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 42 4e-04
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 41 0.001
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 40 0.002
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 40 0.003
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 38 0.009
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 38 0.012
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 37 0.016
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 37 0.016
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 36 0.048
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 33 0.19
05_03_0478 - 14526180-14526578 33 0.34
01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305 32 0.44
11_01_0600 - 4780579-4780839,4781256-4781324,4781535-4781598,478... 31 1.4
03_03_0113 + 14550435-14550822,14550831-14551660,14552105-145522... 30 2.4
10_02_0181 + 6348677-6348946,6348963-6349176,6351048-6351413,635... 29 5.5
07_03_0390 + 17573653-17574089,17574250-17574280,17574397-17575134 28 7.2
04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814 28 7.2
03_06_0707 - 35655084-35655215,35656088-35656229,35656358-356564... 28 7.2
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 28 9.6
05_03_0095 - 8349971-8350171,8350659-8351303 28 9.6
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = -2
Query: 721 KCXASAIXVITTSGKSAHLLSKYRPRCPIIAVTRHPQTARQVHLYRGVLP 572
K A+ V T +G A LLS+ RP CPI A T R+++L G++P
Sbjct: 481 KLEVDAVFVYTNTGHMASLLSRCRPDCPIFAFTTSTSVRRRLNLQWGLIP 530
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2
Query: 703 IXVITTSGKSAHLLSKYRPRCPIIAVTRHPQTARQVHLYRGVLPI 569
I V T +G A LLS YRP I A T + +++ LY+GV+PI
Sbjct: 481 IIVFTRTGSMAVLLSHYRPSSTIFAFTNEERVKQRLALYQGVVPI 525
>03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = -2
Query: 706 AIXVITTSGKSAHLLSKYRPRCPIIAVTRHPQTARQVHLYRGVLPI 569
AI V T G A LLS+ RP PI A T + + + ++LY GV+P+
Sbjct: 1065 AIFVYTKYGHMASLLSRNRPNPPIFAFTDNANSRKSMNLYWGVIPL 1110
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 772 PIXPGXSXXXXAGRRPPKCXASAIXVITTSGKSAHLLSKYRPRCPIIAV 626
P+ P S A R K A+ I V+T G +A L++KYRPR PI++V
Sbjct: 376 PMSPLESLASSAVRTANKAKAALIVVLTRGGTTAKLVAKYRPRVPILSV 424
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -2
Query: 733 RRPPKCXASAIXVITTSGKSAHLLSKYRPRCPIIAV 626
R K A+AI V T SG++A L++KY+P P++AV
Sbjct: 392 RTAMKVKAAAIVVFTFSGRAARLVAKYKPPMPVLAV 427
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = -2
Query: 709 SAIXVITTSGKSAHLLSKYRPRCPIIAVTRHPQTARQVHLYRGVLPI 569
++I V T +G A LLS YRP I A T + +++ LY+GV P+
Sbjct: 505 TSIVVFTRTGFMAILLSHYRPSGTIFAFTDQERVRQRLALYQGVCPV 551
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -2
Query: 721 KCXASAIXVITTSGKSAHLLSKYRPRCPIIAV 626
K AS I T+SG++A L++KYRP P+++V
Sbjct: 379 KVKASVIICFTSSGRAARLIAKYRPTMPVLSV 410
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -2
Query: 721 KCXASAIXVITTSGKSAHLLSKYRPRCPIIAV 626
K AS I T+SG++A L++KYRP P+++V
Sbjct: 379 KVKASVIICFTSSGRAARLIAKYRPTMPVLSV 410
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 35.5 bits (78), Expect = 0.048
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -2
Query: 772 PIXPGXSXXXXAGRRPPKCXASAIXVITTSGKSAHLLSKYRPRCPIIAV 626
P+ P S A R A+ I V+T G +A L++KYRP PI++V
Sbjct: 468 PMSPLESLASSAVRTANSAKAALILVLTRGGTTARLVAKYRPSMPILSV 516
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 712 ASAIXVITTSGKSAHLLSKYRPRCPIIAV 626
AS I V+T G +A L++KYRP P++ V
Sbjct: 379 ASLILVLTRGGTTARLIAKYRPAMPVLFV 407
>05_03_0478 - 14526180-14526578
Length = 132
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -3
Query: 576 CPSSTKSRRRRTGLKDVDNRVQSGLRFGRQRGFVHPRGQRGRRHRLEAGLRLHQH 412
C SS S RR + D+R G R R+RG R +R RRH + A H
Sbjct: 48 CVSSGGSWARRQRRDEEDHRQHDGYRGARRRGQEDHRRRRPRRHAVGAAAEAINH 102
>01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305
Length = 196
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = -3
Query: 585 AACCPSSTKSRRRRTGLKDVDNRVQSGLRFGRQRGFVHPRGQRGRRHRLEAGLRLHQHRP 406
AA P+S+ R RR GL+ V ++G GR+ V R ++ RHR+ R + R
Sbjct: 56 AAATPASS-GRWRRRGLEVVCEAAKTGTATGRRPDSVKKRERQNDRHRIRNHARKAEMRT 114
Query: 405 GHSIGIMTKLQRRRKSA 355
++ L++ RK A
Sbjct: 115 -RMKKVLKALEKLRKKA 130
>11_01_0600 -
4780579-4780839,4781256-4781324,4781535-4781598,
4781791-4781919,4782234-4782541
Length = 276
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 552 RRRTGLKDVDNRVQSGLRFGRQRGFVHPRGQRGRRHR 442
+R G+ D + +Q G+R GR+R ++ R +R R R
Sbjct: 27 QRSPGIADFGDELQRGVRHGRRRTWLRRRARRRERRR 63
>03_03_0113 +
14550435-14550822,14550831-14551660,14552105-14552278,
14552350-14552517
Length = 519
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 576 CPSSTKSRRRRTGLKDVDNRVQSGLRFGRQRGFV--HPRGQRGRRHRLEA 433
C + T RRR L+ R++ LR GR+R FV + GR H L A
Sbjct: 124 CMAMTTGRRRVRALEPSHQRLRHRLRAGRRRQFVGAYAHPATGRFHILHA 173
>10_02_0181 +
6348677-6348946,6348963-6349176,6351048-6351413,
6351607-6351728,6351767-6352093
Length = 432
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -3
Query: 558 SRRRRTGLKDVDNRVQSGLRFGRQRGFVHPRG--QRGRRHRLEAGLRLHQHRPGHSIGIM 385
+RR R + +D + R G ++ FVHP+G + RRHR G+ H +
Sbjct: 244 ARRDRFTRRIMDEHARELERHGAKQHFVHPQGPVRPQRRHRRREGVVPAAHT--DAADAP 301
Query: 384 TKLQRRRKSA 355
T+ QRR K A
Sbjct: 302 TQGQRRVKIA 311
>07_03_0390 + 17573653-17574089,17574250-17574280,17574397-17575134
Length = 401
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 599 LPGGLRVPGDGDDGAARPVLA 661
LPGG R GDG A P+LA
Sbjct: 230 LPGGYRSAGDGGSAAGTPLLA 250
>04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814
Length = 775
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3
Query: 459 RGRRHRLEAGLRLHQHRPGHSIGIMTKLQRRRKSAFVL 346
R RRH E L LH H P ++T RR A VL
Sbjct: 54 RPRRHHHEDSLPLHVHLPPPPDALLTAAADRRSRADVL 91
>03_06_0707 -
35655084-35655215,35656088-35656229,35656358-35656485,
35656852-35656944,35657183-35657252,35657324-35657445,
35658143-35658265,35659453-35659710,35659995-35660074,
35660244-35660389,35660773-35660906,35661001-35661137,
35663013-35663135,35663521-35663590,35663925-35664050,
35664166-35664393
Length = 703
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = -3
Query: 570 SSTKSRRRRTGLKDVDNRVQSGLRFGRQRGFVHPRGQRGRRHRLEAGL 427
++ + +RRR +++ +++ + G+ +RGF+ R RR +E G+
Sbjct: 236 NTREKQRRRLLVQEAEDKQRDGVWIDEKRGFLDKLVSRKRRGNIEPGV 283
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 567 STKSRRRRTG-LKDVDNRVQSGLRFGRQRGFVHPRGQRGRRHR 442
ST+ +R R G L +V R G F + GF P+GQRG+ R
Sbjct: 209 STRGQRGRGGRLANVSRR---GYDFDDEPGFQSPKGQRGQGGR 248
>05_03_0095 - 8349971-8350171,8350659-8351303
Length = 281
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 718 CXASAIXVITTSG-KSAHLLSKYRPRCPIIAVT 623
C +A+ ++ +G +A L YRP+ P IAVT
Sbjct: 29 CVVAALFILLAAGGAAAALFLLYRPQAPAIAVT 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,197,439
Number of Sequences: 37544
Number of extensions: 303039
Number of successful extensions: 757
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -