Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_J06
(861 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 343 3e-95
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 339 2e-94
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 141 1e-34
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 75 1e-14
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.21
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.28
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.85
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 29 1.1
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.5
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.6
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 27 4.5
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 6.0
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 6.0
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.9
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 343 bits (842), Expect = 3e-95
Identities = 150/186 (80%), Positives = 169/186 (90%)
Frame = -1
Query: 696 EFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 517
EFQTNLVPYPRIHFPLVTY+P++SA KA+HE SV EITN CFEP NQMVKCDPR G+YM
Sbjct: 258 EFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYM 317
Query: 516 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQR 337
A C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +AKV R
Sbjct: 318 ATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNR 377
Query: 336 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 157
AVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYE
Sbjct: 378 AVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYE 437
Query: 156 EVGMDS 139
EVG DS
Sbjct: 438 EVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 339 bits (834), Expect = 2e-94
Identities = 150/186 (80%), Positives = 167/186 (89%)
Frame = -1
Query: 696 EFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 517
EFQTNLVPYPRIHFPLVTYAP++SA KA+HE SV EITN CFEP NQMVKCDPR G+YM
Sbjct: 254 EFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYM 313
Query: 516 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQR 337
A C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++AKV R
Sbjct: 314 ATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDR 373
Query: 336 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 157
AVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYE
Sbjct: 374 AVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYE 433
Query: 156 EVGMDS 139
EVG DS
Sbjct: 434 EVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 141 bits (341), Expect = 1e-34
Identities = 70/193 (36%), Positives = 111/193 (57%), Gaps = 3/193 (1%)
Frame = -1
Query: 711 NGTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 532
N + N+VP+PR+HF +V +AP+ + + + +SV E+T F+ N MV DPR
Sbjct: 247 NSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPR 306
Query: 531 HGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 352
HG+Y+ L+RG V K+V+ I +++TK + FV+W P + PP DL
Sbjct: 307 HGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL 361
Query: 351 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDL 181
+ + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA DL
Sbjct: 362 ---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
Query: 180 AALEKDYEEVGMD 142
+ + Y+E G+D
Sbjct: 419 VSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 75.4 bits (177), Expect = 1e-14
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 7/183 (3%)
Frame = -1
Query: 684 NLVPYPRIHFPLVTYAPVISA---EKAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYM 517
+L+P PR HF L +Y P + E + +V ++ P NQMV +P + ++
Sbjct: 259 SLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFI 318
Query: 516 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQR 337
+ + +G+ P DV+ ++ I+ +R F+ W P +V ++ + P + ++ +
Sbjct: 319 SILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL-- 376
Query: 336 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEK 166
ML+N T+IA + R ++D + + AF+ Y E + E EF +R+ +A L
Sbjct: 377 ---MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLIN 433
Query: 165 DYE 157
+YE
Sbjct: 434 EYE 436
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.21
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = -2
Query: 629 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 450
S+P+ P P S + P P + S VV P + RP++P
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 449 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 363
P LS V PV+ V + PP P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.7 bits (66), Expect = 0.28
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = -2
Query: 641 TRQSSLPRRPTM--NSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*T 468
T S+ P PT+ S +P + T+ ++ + +TPV ++ CT TS P T
Sbjct: 402 TGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--T 459
Query: 467 RPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 375
+ S P +N +T S TS P
Sbjct: 460 STPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Score = 30.3 bits (65), Expect = 0.37
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = -2
Query: 695 SSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTW 516
S+ + + TPV++S++ T SS P T P + T+ ++ + +TPV ++
Sbjct: 499 STSVPYTSTPVTSSNY--TISSSTPVTST------PVTTTNCTTSTSVLYTSTPVTSTPL 550
Query: 515 LAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 381
CT TS P T P S ++ S++ PV+ + TTS
Sbjct: 551 ATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 27.9 bits (59), Expect = 2.0
Identities = 25/97 (25%), Positives = 44/97 (45%)
Frame = -2
Query: 671 TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 492
TP++T++ T +S+P T + +P + T+ ++ + +TPV ++ CT
Sbjct: 420 TPLTTTNC--TTSTSVPYTSTPVT-STPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTS 476
Query: 491 TSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 381
TS P T + S P +N +T S TS
Sbjct: 477 TSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
Score = 26.6 bits (56), Expect = 4.5
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = -2
Query: 704 PHXSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 525
P+ S+ +T TP++T++ T +S+P T + +P + T+ ++ + +TPV +
Sbjct: 457 PYTSTPVT--STPLTTTNC--TTSTSIPYTSTPVT-STPLTTTNCTTSTSVPYTSTPVTS 511
Query: 524 STWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQ-PVSRSVSTTS 381
S + T VTS P T + + SVL S+ P++ + TTS
Sbjct: 512 SNYTISSSTPVTSTPV--TTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 0.85
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -2
Query: 662 STSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSY 483
STS + T SS RP +S S +H SS ++ ++ PV ++ + + +S+
Sbjct: 377 STSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNSTSSRSSSH 435
Query: 482 PRM*TRPSLPSKPSVLSNSST 420
+ SL SKP + ++SS+
Sbjct: 436 SSSHSLSSLSSKPILTASSSS 456
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +1
Query: 457 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDW 636
S G +LGY ++ A++V+A + V HL+ G D + K G D
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459
Query: 637 RVRDQWEVDTGVR 675
R Q+E++ G++
Sbjct: 460 VDRVQYELEAGLQ 472
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 585 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 460
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 293 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 120
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 119 EPKSTK 102
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 668 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 552
P S + T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1242 PSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -2
Query: 701 HXSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 522
H + LTP + S +S + +S +R ++N+ PS + +H+SS T + PV+++
Sbjct: 121 HRKRNVESILTPKNPSLFSSSNAAS--QRGSLNTAPSNFAYSHSSSLQTSASSRPPVLSN 178
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 635 QSSLPRRPTMNSFPSPRSQTHASSPPTR 552
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 461 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 375
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 480 WVRRHHGTAYSKPCTCHDGG 539
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,094,296
Number of Sequences: 5004
Number of extensions: 65900
Number of successful extensions: 248
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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