Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_J02
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0276 + 23771233-23771268,23773552-23773897,23774425-237745... 123 2e-28
03_05_1050 - 29966031-29966076,29966180-29966232,29966420-299668... 86 4e-17
02_05_0970 - 33179180-33179210,33179297-33179441,33180307-331803... 81 8e-16
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 68 8e-12
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 50 2e-06
03_06_0019 - 31078669-31080081 33 0.27
06_01_0077 + 626126-626137,626222-627421 33 0.36
07_03_0762 + 21324550-21325414,21325606-21325746,21325993-213261... 31 1.1
05_02_0067 + 6298232-6298294,6298532-6299068 31 1.1
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690... 30 1.9
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 30 2.5
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 30 2.5
11_01_0311 + 2322511-2323527 29 3.3
03_06_0080 - 31512792-31513046,31514087-31514202,31514797-315149... 29 3.3
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592 29 5.8
08_01_0277 - 2262557-2264128 28 7.6
08_01_0275 + 2249794-2251338 28 7.6
07_01_0359 - 2633735-2634115,2634345-2634600,2634708-2635552,263... 28 7.6
06_01_0072 + 596333-597442 28 7.6
>05_05_0276 +
23771233-23771268,23773552-23773897,23774425-23774541,
23774712-23774810,23774949-23775016,23775107-23775181,
23775386-23775931,23776040-23776092,23776163-23776204,
23776314-23776458,23776541-23776651,23777496-23777921,
23778116-23778373
Length = 773
Score = 123 bits (296), Expect = 2e-28
Identities = 65/156 (41%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Frame = -1
Query: 557 SLALGQDLTALGLNLNSPDNLNLTFAGPWADTPCRPQDMDYHVPPEYLINGSIREKLAPL 378
SLALG DLT LGL++NS DNL TF PW+ P + ++ Y +P Y + L L
Sbjct: 375 SLALGIDLTTLGLDMNSSDNLYKTFGSPWSSEPVK-EEYSYEIPDCY--SSMQPPPLQAL 431
Query: 377 RLGRYKEDLLFYLFYCFVGDVLQIAAAAELYNREWQYHMEEKVWISQAPGMPMVEKTSTY 198
R+ LFY+FY D Q+ AA E+ W YH E + W+ +AP + KT+TY
Sbjct: 432 HFLRFHLMTLFYIFYSMPQDAAQLYAANEICKYGWVYHKELRQWVKRAPNTTPLVKTTTY 491
Query: 197 ERGTYYFFDAHNWRKVPKE-FHLDYSKLEGRPQLPP 93
E+G Y FDA+ W +PK+ F L Y +E P LPP
Sbjct: 492 EQGLCYLFDANIWDAIPKDNFILRYDDIEKIPALPP 527
>03_05_1050 -
29966031-29966076,29966180-29966232,29966420-29966845,
29966983-29967060,29967135-29967220,29969054-29969155,
29969221-29969427,29970528-29970885,29971011-29971174,
29971258-29971366,29971595-29971600
Length = 544
Score = 85.8 bits (203), Expect = 4e-17
Identities = 43/96 (44%), Positives = 58/96 (60%)
Frame = -1
Query: 575 SDPSLVSLALGQDLTALGLNLNSPDNLNLTFAGPWADTPCRPQDMDYHVPPEYLINGSIR 396
+D L SLALG DLT LGLNLNSPDNL TF PW++ P + + ++H+P Y N
Sbjct: 452 NDADLASLALGMDLTTLGLNLNSPDNLYKTFGSPWSNEPAKGEP-EFHIPACY--NAEQP 508
Query: 395 EKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAEL 288
L P+ +++ LFY+FY D Q+ AA+EL
Sbjct: 509 PPLQPIHFQKFQTLTLFYIFYSMPRDEAQLCAASEL 544
>02_05_0970 -
33179180-33179210,33179297-33179441,33180307-33180362,
33180650-33180691,33180814-33180866,33181059-33181490,
33181630-33181707,33181785-33181870,33183588-33183689,
33183754-33183960,33184976-33185336,33185463-33185626,
33185709-33185817,33186468-33186485
Length = 627
Score = 81.4 bits (192), Expect = 8e-16
Identities = 42/96 (43%), Positives = 57/96 (59%)
Frame = -1
Query: 575 SDPSLVSLALGQDLTALGLNLNSPDNLNLTFAGPWADTPCRPQDMDYHVPPEYLINGSIR 396
+D L SLALG DLT LGLNLNSPDNL TF PW++ P + + ++H P Y +
Sbjct: 459 NDVDLSSLALGIDLTTLGLNLNSPDNLYKTFGSPWSNEPAKGEP-EFHTPACY--SAEQP 515
Query: 395 EKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAEL 288
L P+ +++ LFY+FY D Q+ AA+EL
Sbjct: 516 PPLQPIHFQKFQTPTLFYIFYSMPRDEAQLCAASEL 551
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 68.1 bits (159), Expect = 8e-12
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -1
Query: 287 YNREWQYHMEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKE-FHLDYSKLEG 111
YNR W YH E +VW+++ P + + KT YERG+Y FD +NW + K+ F L Y ++E
Sbjct: 104 YNRGWFYHKEVRVWLTRIPNVEPLVKTPHYERGSYGCFDPNNWETIRKDNFVLHYDQIEK 163
Query: 110 RPQLP 96
+P +P
Sbjct: 164 KPAIP 168
>03_05_0520 + 25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Frame = -1
Query: 356 DLLFYLFYCFVGDVLQIAAAAELYNREWQYHMEEKVWISQAPGMPMVEKTSTYERGTYYF 177
DLLF+ FY Q +A EL + W++H + W Q P V T YERG+Y +
Sbjct: 754 DLLFFAFYYQQNTYQQFLSARELKKQSWRFHRKYNTWF-QRHVEPQV-TTDEYERGSYVY 811
Query: 176 FDAH--------NW-RKVPKEFHLDYSKLE 114
FD H W +++ +F +Y+ LE
Sbjct: 812 FDFHVIDDGTGSGWCQRIKNDFTFEYNFLE 841
>03_06_0019 - 31078669-31080081
Length = 470
Score = 33.1 bits (72), Expect = 0.27
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = -3
Query: 312 TNCGCSRVIQSRMAISYGGE--GVDLTSAR----HANGREDFNVRTRHLLLLRCAQLEKG 151
T R++ + S+GGE GVD+ S H + R D T LLL ++LEK
Sbjct: 41 TEVNHGRILGALDDASHGGELGGVDMVSISDGLGHGDDRSDLGRLTESLLLAMPSELEKL 100
Query: 150 AERVSFGLQQAGG 112
R++ AGG
Sbjct: 101 VGRINASASAAGG 113
>06_01_0077 + 626126-626137,626222-627421
Length = 403
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 113 PPACCNPNETLSAPFSNCAHRRSSRCRVRTLKS-SRPLACR 232
PP PN + AP+S+ HR+ C V L + + PL C+
Sbjct: 84 PPLLVRPNVRVKAPYSSNGHRKLRSCEVIDLANRNTPLRCQ 124
>07_03_0762 +
21324550-21325414,21325606-21325746,21325993-21326177,
21326200-21326410,21326526-21326769,21326853-21327003,
21327089-21327439
Length = 715
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Frame = +2
Query: 434 DNPCP-VVCKAYPPMGQQTSS*GYQVNLN----SILKQSNPVP-MLATLD*GPIP 580
D P P V+C YPP G + + YQVNL+ ++ K ++ P M AT G +P
Sbjct: 33 DEPPPWVLCGPYPPSGNYSKNGTYQVNLDLLSTTLPKNTSSSPAMYATGTVGDVP 87
>05_02_0067 + 6298232-6298294,6298532-6299068
Length = 199
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -3
Query: 306 CG-CSRVIQSRMAISYGGEGVDLTSARHANGREDFNVRTRHLLLLRCAQLEKGAERVSFG 130
CG C+ ++ RM GG GV+ H DFN TR L A + R SF
Sbjct: 105 CGLCAEAVRERMRGGGGGGGVEAALRWHMEVCRDFNSTTRLNPKLSLAGSMRDIARRSFN 164
Query: 129 LQ-QAGGSAAVT 97
+ A SAA T
Sbjct: 165 RRTTASTSAAAT 176
>11_05_0050 +
18665251-18665613,18667280-18667744,18668548-18669037,
18669115-18669143
Length = 448
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +2
Query: 101 TAADPPACCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVRSTPSPPYDIAI 277
+ A P NP + S+ H R+ +C+V T+K + C + + + PY + +
Sbjct: 230 SGATTPVNANPPGSRSSDKQPICHCRAGKCKVETIKGQKYYVC-CIQKGQGACPYQVPV 287
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +2
Query: 122 CCNPNETLSAPFSNCAHRRSSRCRVRTL---KSSRPLACRALVRSTPSPP 262
C P LS P S C H R C V T+ SR + + S+ PP
Sbjct: 517 CRRPATVLSPPTSRCCHHRYEICAVATVAVAPCSRAVVADDVAASSAVPP 566
>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 605 RSIDFIRAAESDPSLVSLALGQDLTALGLNLNSPDNL 495
+ + ++A SDP++ L L + LGLNL S D L
Sbjct: 2214 KRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTL 2250
>11_01_0311 + 2322511-2323527
Length = 338
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 92 GAVTAADPPACCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVRSTPSPPYDI 271
GAV AD AC P+ T S C+ S+ + S ++ RA + + P+PP +
Sbjct: 23 GAVRVADVAACTAPSST---RVSTCSSSSSTTASSSSPTLSVTVSYRATLLAAPAPPLQL 79
Query: 272 AI 277
+
Sbjct: 80 RL 81
>03_06_0080 -
31512792-31513046,31514087-31514202,31514797-31514911,
31514997-31515056,31515619-31515688,31515952-31515986,
31516094-31516231,31516369-31516737
Length = 385
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 476 PWAD-TPCRPQDMDYHVPPEYLINGSIREK 390
PW TPC D+ + VPPE+ +G + K
Sbjct: 149 PWTQPTPCSHVDLKFPVPPEHCTSGIMDNK 178
>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
Length = 853
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/75 (28%), Positives = 28/75 (37%)
Frame = +2
Query: 65 RRGCAT*AHGAVTAADPPACCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVR 244
RRG + A A AAD P C + + A + CAH R + CR
Sbjct: 303 RRGSRSSARCAA-AADHPGCSDKLTSPDAAVAPCAHDTKILFVDRVEDADAAKKCRHTAA 361
Query: 245 STPSPPYDIAIRDCI 289
P P D +C+
Sbjct: 362 PPPPPTKDPTTVECV 376
>08_01_0277 - 2262557-2264128
Length = 523
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 496 RLSGEFKFNPKAVKSCPNASDTRLGSDSAARIKSIDRLFQIGLVSLYPVC 645
RL+G F+P ++S P ++T G D A ++++ GLV Y VC
Sbjct: 223 RLAG---FDPANIRSIPTGAETDYGLDPARLLEAMQADADAGLVPTY-VC 268
>08_01_0275 + 2249794-2251338
Length = 514
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 496 RLSGEFKFNPKAVKSCPNASDTRLGSDSAARIKSIDRLFQIGLVSLYPVC 645
RL+G F+P ++S P ++T G D A ++++ GLV Y VC
Sbjct: 222 RLAG---FDPANIRSIPTGAETDYGLDPARLLEAMQADADAGLVPTY-VC 267
>07_01_0359 -
2633735-2634115,2634345-2634600,2634708-2635552,
2635681-2635956,2636778-2636941,2637924-2638197
Length = 731
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 170 HRRSSRCRVRTLKSSRPLACRALVRSTPSPPYDIAIRDCI 289
H + R R+ +P LVR P PP D I+D +
Sbjct: 176 HVSNMRAAARSTPDVKPEEFAVLVRDVPKPPPDQTIKDSV 215
>06_01_0072 + 596333-597442
Length = 369
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 533 TALGLNLNSPDNLNLTFAGPWA 468
++LGL LN P NL AGPW+
Sbjct: 119 SSLGLFLNCPKNLRNDDAGPWS 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,186,014
Number of Sequences: 37544
Number of extensions: 463976
Number of successful extensions: 1369
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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