Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I23
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026...    29   4.8  
06_01_0651 + 4711369-4712431,4713069-4713763                           29   6.4  
02_02_0741 + 13590883-13591582,13591955-13592250                       28   8.4  

>01_05_0117 -
           18300157-18301106,18301149-18301543,18302592-18302681,
           18303723-18303836,18303903-18304046,18316147-18316312,
           18316396-18317130,18317219-18317422,18317496-18318177,
           18318272-18318528,18318604-18319298,18319345-18319382,
           18319847-18319928,18320018-18320112,18320443-18320526,
           18320601-18320891,18321521-18321853,18321948-18322150,
           18322243-18322399,18322482-18322585,18322675-18322835,
           18323511-18323824,18324317-18324589,18324666-18324967,
           18325459-18325549,18326140-18326190,18326700-18326768,
           18326926-18327017,18327082-18327148,18328582-18328746,
           18329027-18329103,18329572-18329766,18330208-18330275,
           18331081-18331172,18331399-18331522,18331608-18331705,
           18332384-18332997,18333620-18333626
          Length = 2892

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
 Frame = -2

Query: 614 STVRSQLLPSSVLTWMPXHSSCSTEECVLLSSSXQGQYVPMAIEEQV--AIIYC-GVRGH 444
           ++V ++  P   L  +P H++ ++E    LSS     + P+   E+V   +I C  V+ H
Sbjct: 428 TSVENRSFPLEFLALLPSHTTVASESLCSLSS-----HHPLGPREKVKQGLICCHRVKLH 482

Query: 443 LDKLDPSKITAFEKEFTQHIKTSH-QGLLSTIAKD 342
           +  +  + +  FEK+ TQ +K +  + L+  I KD
Sbjct: 483 IQSI-YTVVVQFEKKSTQLLKNNGLRYLIKLIRKD 516


>06_01_0651 + 4711369-4712431,4713069-4713763
          Length = 585

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 524 SSSXQGQYVPMAIEEQVAIIY-CGVRGHLDKLDPSKITAFEKE 399
           + + +GQ V + +   +A  Y CGV GH D L       F +E
Sbjct: 372 AGAAKGQAVALRVSADMAAAYRCGVEGHQDSLYAHSFRQFYRE 414


>02_02_0741 + 13590883-13591582,13591955-13592250
          Length = 331

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 461 CGVRGHLDKLDPSKITAF--EKEFTQHIKTSHQGLLSTIAKDGQITPESDAS 312
           CG +GH  +  P K+ A   EK+  Q + ++     ST  KDG + P S A+
Sbjct: 96  CGEQGHYVRNCPWKVFARSPEKDEKQCLGSNQAPSQSTDKKDGTLQPNSGAN 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,186,920
Number of Sequences: 37544
Number of extensions: 344679
Number of successful extensions: 771
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)