Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I23
         (867 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y07894-1|CAA69202.1|  552|Drosophila melanogaster mitochondrial ...   130   2e-30
BT003592-1|AAO39595.1|  552|Drosophila melanogaster HL08087p pro...   130   2e-30
AE013599-3468|AAF46903.1|  552|Drosophila melanogaster CG3612-PA...   130   2e-30

>Y07894-1|CAA69202.1|  552|Drosophila melanogaster mitochondrial ATP
           synthase alphasubunit precursor protein.
          Length = 552

 Score =  130 bits (314), Expect = 2e-30
 Identities = 60/79 (75%), Positives = 67/79 (84%)
 Frame = -2

Query: 512 QGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQI 333
           QGQYVPMAIE+QVA+IYCGVRGHLDK+DP+KIT FEKEF QHIKTS Q LL TIAKDG I
Sbjct: 472 QGQYVPMAIEDQVAVIYCGVRGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAI 531

Query: 332 TPESDASLKKIVTDFLATF 276
           +  SDA LK IV  F++TF
Sbjct: 532 SEASDAKLKDIVAKFMSTF 550



 Score =  102 bits (244), Expect = 7e-22
 Identities = 55/67 (82%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -1

Query: 711 PXINVGLSVSRVGSAAQTKAMKQWPXH-EAGXAQYREVAAFAQFGSDLDAXTQQLLNRGM 535
           P INVGLSVSRVGSAAQTKAMKQ     +   AQYREVAAFAQFGSDLDA TQQLLNRG+
Sbjct: 405 PAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGV 464

Query: 534 RLTELLK 514
           RLTELLK
Sbjct: 465 RLTELLK 471


>BT003592-1|AAO39595.1|  552|Drosophila melanogaster HL08087p
           protein.
          Length = 552

 Score =  130 bits (314), Expect = 2e-30
 Identities = 60/79 (75%), Positives = 67/79 (84%)
 Frame = -2

Query: 512 QGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQI 333
           QGQYVPMAIE+QVA+IYCGVRGHLDK+DP+KIT FEKEF QHIKTS Q LL TIAKDG I
Sbjct: 472 QGQYVPMAIEDQVAVIYCGVRGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAI 531

Query: 332 TPESDASLKKIVTDFLATF 276
           +  SDA LK IV  F++TF
Sbjct: 532 SEASDAKLKDIVAKFMSTF 550



 Score =  102 bits (244), Expect = 7e-22
 Identities = 55/67 (82%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -1

Query: 711 PXINVGLSVSRVGSAAQTKAMKQWPXH-EAGXAQYREVAAFAQFGSDLDAXTQQLLNRGM 535
           P INVGLSVSRVGSAAQTKAMKQ     +   AQYREVAAFAQFGSDLDA TQQLLNRG+
Sbjct: 405 PAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGV 464

Query: 534 RLTELLK 514
           RLTELLK
Sbjct: 465 RLTELLK 471


>AE013599-3468|AAF46903.1|  552|Drosophila melanogaster CG3612-PA
           protein.
          Length = 552

 Score =  130 bits (314), Expect = 2e-30
 Identities = 60/79 (75%), Positives = 67/79 (84%)
 Frame = -2

Query: 512 QGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQI 333
           QGQYVPMAIE+QVA+IYCGVRGHLDK+DP+KIT FEKEF QHIKTS Q LL TIAKDG I
Sbjct: 472 QGQYVPMAIEDQVAVIYCGVRGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAI 531

Query: 332 TPESDASLKKIVTDFLATF 276
           +  SDA LK IV  F++TF
Sbjct: 532 SEASDAKLKDIVAKFMSTF 550



 Score =  102 bits (244), Expect = 7e-22
 Identities = 55/67 (82%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -1

Query: 711 PXINVGLSVSRVGSAAQTKAMKQWPXH-EAGXAQYREVAAFAQFGSDLDAXTQQLLNRGM 535
           P INVGLSVSRVGSAAQTKAMKQ     +   AQYREVAAFAQFGSDLDA TQQLLNRG+
Sbjct: 405 PAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGV 464

Query: 534 RLTELLK 514
           RLTELLK
Sbjct: 465 RLTELLK 471


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,240,008
Number of Sequences: 53049
Number of extensions: 577462
Number of successful extensions: 1297
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)