Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I20
         (829 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB032255-1|BAA89212.1| 1972|Homo sapiens bromodomain adjacent to...    36   0.24 
BC012576-1|AAH12576.1|  643|Homo sapiens BAZ2B protein protein.        35   0.31 

>AB032255-1|BAA89212.1| 1972|Homo sapiens bromodomain adjacent to
           zinc finger domain 2B protein.
          Length = 1972

 Score = 35.5 bits (78), Expect = 0.24
 Identities = 25/96 (26%), Positives = 43/96 (44%)
 Frame = -2

Query: 522 RGDVSYSPPEPHAALKLKSMQELQSFLDSNPCPPLSLDNFSFSSRAILGEYVQPCADVAD 343
           +G+V+Y  P      KL+   E+  +L  N    +S DNFSFS++  +G++ +   D   
Sbjct: 571 QGEVAYYAP---CGKKLRQYPEVIKYLSRNGIMDISRDNFSFSAKIRVGDFYE-ARDGPQ 626

Query: 342 PLVFNETEITKRLEEARALSSLGSRPTPPPLDRRME 235
            + +   +    +   RA+     RP  P   R  E
Sbjct: 627 EMQWCLLKEEDVIPRIRAMEGRRGRPPNPDRQRARE 662


>BC012576-1|AAH12576.1|  643|Homo sapiens BAZ2B protein protein.
          Length = 643

 Score = 35.1 bits (77), Expect = 0.31
 Identities = 25/96 (26%), Positives = 43/96 (44%)
 Frame = -2

Query: 522 RGDVSYSPPEPHAALKLKSMQELQSFLDSNPCPPLSLDNFSFSSRAILGEYVQPCADVAD 343
           +G+V+Y  P      KL+   E+  +L  N    +S DNFSFS++  +G++ +   D   
Sbjct: 473 QGEVAYYAP---CGKKLRQYPEVIKYLSRNGIMDISRDNFSFSAKIRVGDFYE-ARDGPQ 528

Query: 342 PLVFNETEITKRLEEARALSSLGSRPTPPPLDRRME 235
            + +   +    +   RA+     RP  P   R  E
Sbjct: 529 GMQWCLLKEEDVIPRIRAMEGRRGRPPNPDRQRARE 564


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,929,642
Number of Sequences: 237096
Number of extensions: 1051215
Number of successful extensions: 3181
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3181
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)