Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I20
         (829 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein...    42   4e-04
Z92826-9|CAD90172.1|  701|Caenorhabditis elegans Hypothetical pr...    28   9.4  
AL132860-33|CAB60507.2|  701|Caenorhabditis elegans Hypothetical...    28   9.4  

>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
           protein.
          Length = 1376

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
 Frame = -2

Query: 534 TAASRGDVSYSPPEPHAALKLKSMQELQSFLDSNPCPPLSLDNFSFSSRAILGEYVQPCA 355
           +A  +GDVSY  P      KL +  E+  +L  N    ++ DNF F+++ ++GE++ P  
Sbjct: 348 SAGVKGDVSYFAP---CGKKLSTYSEVVRYLTKNSIHYITRDNFLFNTKLVIGEFIVPKQ 404

Query: 354 DVADP-------LVFNETEITKRLEEARAL 286
             AD         +F E +I K L     L
Sbjct: 405 TEADETQQEREFAMFTEDDINKELTRLNVL 434


>Z92826-9|CAD90172.1|  701|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1a protein.
          Length = 701

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -2

Query: 588 TGXKAGRRVTXIPXXCPGTAASRGDVSYSPPEPHAAL-KLKSMQELQSFLDSNPCPPLS 415
           +G  +G R T      P + A R  V  S P PHA   +LK +    S +D    PP++
Sbjct: 279 SGAVSGSRHTSGENGQPPSPAGRRIVPLSMPSPHAVTPELKRLASKDSNVDRPRTPPVT 337


>AL132860-33|CAB60507.2|  701|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1a protein.
          Length = 701

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -2

Query: 588 TGXKAGRRVTXIPXXCPGTAASRGDVSYSPPEPHAAL-KLKSMQELQSFLDSNPCPPLS 415
           +G  +G R T      P + A R  V  S P PHA   +LK +    S +D    PP++
Sbjct: 279 SGAVSGSRHTSGENGQPPSPAGRRIVPLSMPSPHAVTPELKRLASKDSNVDRPRTPPVT 337


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,010,257
Number of Sequences: 27780
Number of extensions: 135640
Number of successful extensions: 418
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)