Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I16
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    29   0.12 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.66 
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            25   2.7  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   3.5  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 29.5 bits (63), Expect = 0.12
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPGFAGQ 86
           GL  R+ +RG P  P     + + + D+G+   PG  G PG +   PG +G+
Sbjct: 451 GLSGRKGDRGVPGSPGLPATVAAIKGDKGEPGFPGAIGRPGKV-GVPGLSGE 501



 Score = 27.1 bits (57), Expect = 0.66
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -1

Query: 241 SGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGP 122
           SGL  R    G P  P+    L   Q ++GD   PG  GP
Sbjct: 602 SGLMGRPGNDGLPG-PQGQRGLPGPQGEKGDQGPPGFIGP 640



 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = -1

Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPG 134
           GE     P  + E+G P RP   GR D      G+   PG
Sbjct: 536 GEKGDACPVVKGEKGLPGRPGKTGR-DGPPGLTGEKGEPG 574



 Score = 23.8 bits (49), Expect = 6.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 157 QGDHSGPGEAGPGPLHRGPGFAGQ 86
           +GD   PG AGP  +   PG  G+
Sbjct: 727 KGDKGLPGLAGPAGIPGAPGAPGE 750


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
 Frame = -1

Query: 250 EAASGLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQEVN 77
           +   G+P R    G P      G   S      QG    PG+ GP  L   PG  G  + 
Sbjct: 446 KGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYGIP 505

Query: 76  GSE 68
           G +
Sbjct: 506 GQK 508



 Score = 27.1 bits (57), Expect = 0.66
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -1

Query: 244 ASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 83
           A GLP R+ E+G P RP   G        +G+    GE G       PG  G +
Sbjct: 545 APGLPGRDGEKGEPGRPGLPGA-------KGERGLKGELGGRCTDCRPGMKGDK 591



 Score = 26.2 bits (55), Expect = 1.2
 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
 Frame = -1

Query: 256 RGEAA-SGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG----PG-PLHRG-PG 98
           +GE   +GL   + E+G P      G++      +GD   PGEAG    PG P   G PG
Sbjct: 666 KGEKGENGLMGIKGEKGFPGPVGPEGKMGLRGM-KGDKGRPGEAGIDGAPGAPGKDGLPG 724

Query: 97  FAGQEVNG 74
             GQ V G
Sbjct: 725 RHGQTVKG 732


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 426 PFVLGRFNFLGPTKQPILVR 485
           P +L +F+FL   K P+L+R
Sbjct: 10  PCILEQFHFLNDLKYPVLIR 29


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = -2

Query: 270 MYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCI 109
           M+  S+  +R   +L     ++ + QK  V   +SN+ +A   + ++Q   RC+
Sbjct: 315 MWQLSDGTKRARVRLPAKAAKQLVGQKLTVSCCISNIKEAPAINLQQQRCYRCL 368


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,757
Number of Sequences: 2352
Number of extensions: 14815
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)