Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_I16
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b... 86 2e-16
BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+ transp... 85 2e-16
BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+ transp... 85 2e-16
AY871272-1|AAX11428.1| 256|Homo sapiens cell proliferation-indu... 85 2e-16
AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+ transp... 85 2e-16
AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+ transp... 85 3e-16
BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+ transp... 81 3e-15
AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+ transp... 76 1e-13
L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen ... 34 0.51
BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alph... 34 0.51
BC007574-1|AAH07574.1| 561|Homo sapiens Unknown (protein for IM... 34 0.51
AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha... 34 0.51
AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collage... 34 0.51
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 34 0.67
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 34 0.67
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 34 0.67
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 34 0.67
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 33 1.2
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 33 1.2
D17391-1|BAA04214.1| 472|Homo sapiens alpha 4(IV) collagen prot... 33 1.2
BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII, a... 33 1.2
BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha... 33 1.2
BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha... 33 1.2
AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen mid... 33 1.2
AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen lon... 33 1.2
AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen sho... 33 1.2
AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collag... 33 1.2
AL031282-6|CAI20032.1| 783|Homo sapiens cell division cycle 2-l... 33 1.2
AF080694-3|AAC95298.1| 781|Homo sapiens PITSLRE protein kinase ... 33 1.2
AF080683-1|AAC83664.1| 755|Homo sapiens PITSLRE protein kinase ... 33 1.2
AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen pro... 33 1.2
AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen pro... 33 1.2
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 33 1.2
AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen prot... 33 1.2
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 33 1.6
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 33 1.6
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 33 1.6
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 33 1.6
AF042498-1|AAC04830.1| 1245|Homo sapiens rod photoreceptor CNG-c... 33 1.6
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 33 1.6
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 33 1.6
AL731557-2|CAI14825.1| 334|Homo sapiens ventral anterior homeob... 32 2.1
V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA enco... 32 2.7
M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein. 32 2.7
AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha ... 32 2.7
AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha ... 32 2.7
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 32 2.7
M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein. 31 3.6
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 31 3.6
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 31 3.6
BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein. 31 3.6
AL050341-5|CAI20432.1| 225|Homo sapiens collagen type IX alpha ... 31 3.6
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 31 4.7
BC043347-1|AAH43347.1| 886|Homo sapiens general transcription f... 31 4.7
BC012342-1|AAH12342.1| 953|Homo sapiens cylindromatosis (turban... 31 4.7
AK090421-1|BAC03402.1| 246|Homo sapiens FLJ00330 protein protein. 31 4.7
AJ250014-1|CAB93533.1| 956|Homo sapiens cyld protein. 31 4.7
AF465407-1|AAL73493.1| 413|Homo sapiens transcription factor II... 31 4.7
AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII colla... 31 4.7
AF133123-1|AAD41475.1| 886|Homo sapiens transcription factor II... 31 4.7
AC012486-1|AAX88853.1| 886|Homo sapiens unknown protein. 31 4.7
AB020656-1|BAA74872.2| 960|Homo sapiens KIAA0849 protein protein. 31 4.7
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 31 6.3
X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (... 31 6.3
S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1... 31 6.3
M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen... 31 6.3
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 31 6.3
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 31 6.3
AY923834-1|AAY17361.1| 2108|Homo sapiens kinesin family member 2... 31 6.3
AK026080-1|BAB15353.1| 863|Homo sapiens protein ( Homo sapiens ... 31 6.3
AK001019-1|BAA91469.1| 406|Homo sapiens protein ( Homo sapiens ... 31 6.3
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag... 31 6.3
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 30 8.3
>X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b
protein.
Length = 256
Score = 85.8 bits (203), Expect = 2e-16
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Frame = -2
Query: 678 GKVRLGFIPEEWFHXSXXXXXXXXXXXXVWXWQHTCAAKEIYVMEHEYYSGLSLL-VMVY 502
GKVR G IPEE+F +KEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLVLYALSKEIYVISAETFTALSVLGVMVY 111
Query: 501 VAHVKFGPKLAAWLDQGXXXXXXXXXXXXEPNRESTGGRNRGREDGAVARARDXXXXXXX 322
K+GP +A + D+ + + + E A +
Sbjct: 112 GIK-KYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAI-DTEKSQQALVQKRHYLFDV 169
Query: 321 XXXXXXXXXXXXXRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITP 142
RERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 170 QRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSIST 229
Query: 141 DQEKQALDRCIADLASLARK 82
QEK+ + +CIADL LA+K
Sbjct: 230 QQEKETIAKCIADLKLLAKK 249
>BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 85.4 bits (202), Expect = 2e-16
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Frame = -2
Query: 678 GKVRLGFIPEEWFHXSXXXXXXXXXXXXVWXWQHTCAAKEIYVMEHEYYSGLSLL-VMVY 502
GKVR G IPEE+F +KEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY 111
Query: 501 VAHVKFGPKLAAWLDQGXXXXXXXXXXXXEPNRESTGGRNRGREDGAVARARDXXXXXXX 322
K+GP +A + D+ + + + E A +
Sbjct: 112 GIK-KYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAI-DTEKSQQALVQKRHYLFDV 169
Query: 321 XXXXXXXXXXXXXRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITP 142
RERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 170 QRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSIST 229
Query: 141 DQEKQALDRCIADLASLARK 82
QEK+ + +CIADL LA+K
Sbjct: 230 QQEKETIAKCIADLKLLAKK 249
>BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 85.4 bits (202), Expect = 2e-16
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Frame = -2
Query: 678 GKVRLGFIPEEWFHXSXXXXXXXXXXXXVWXWQHTCAAKEIYVMEHEYYSGLSLL-VMVY 502
GKVR G IPEE+F +KEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY 111
Query: 501 VAHVKFGPKLAAWLDQGXXXXXXXXXXXXEPNRESTGGRNRGREDGAVARARDXXXXXXX 322
K+GP +A + D+ + + + E A +
Sbjct: 112 GIK-KYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAI-DTEKSQQALVQKRHYLFDV 169
Query: 321 XXXXXXXXXXXXXRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITP 142
RERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 170 QRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSIST 229
Query: 141 DQEKQALDRCIADLASLARK 82
QEK+ + +CIADL LA+K
Sbjct: 230 QQEKETIAKCIADLKLLAKK 249
>AY871272-1|AAX11428.1| 256|Homo sapiens cell
proliferation-inducing protein 47 protein.
Length = 256
Score = 85.4 bits (202), Expect = 2e-16
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Frame = -2
Query: 678 GKVRLGFIPEEWFHXSXXXXXXXXXXXXVWXWQHTCAAKEIYVMEHEYYSGLSLL-VMVY 502
GKVR G IPEE+F +KEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY 111
Query: 501 VAHVKFGPKLAAWLDQGXXXXXXXXXXXXEPNRESTGGRNRGREDGAVARARDXXXXXXX 322
K+GP +A + D+ + + + E A +
Sbjct: 112 GIK-KYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAI-DTEKSQQALVQKRHYLFDV 169
Query: 321 XXXXXXXXXXXXXRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITP 142
RERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 170 QRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSIST 229
Query: 141 DQEKQALDRCIADLASLARK 82
QEK+ + +CIADL LA+K
Sbjct: 230 QQEKETIAKCIADLKLLAKK 249
>AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 85.4 bits (202), Expect = 2e-16
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Frame = -2
Query: 678 GKVRLGFIPEEWFHXSXXXXXXXXXXXXVWXWQHTCAAKEIYVMEHEYYSGLSLL-VMVY 502
GKVR G IPEE+F +KEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY 111
Query: 501 VAHVKFGPKLAAWLDQGXXXXXXXXXXXXEPNRESTGGRNRGREDGAVARARDXXXXXXX 322
K+GP +A + D+ + + + E A +
Sbjct: 112 GIK-KYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAI-DTEKSQQALVQKRHYLFDV 169
Query: 321 XXXXXXXXXXXXXRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITP 142
RERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 170 QRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSIST 229
Query: 141 DQEKQALDRCIADLASLARK 82
QEK+ + +CIADL LA+K
Sbjct: 230 QQEKETIAKCIADLKLLAKK 249
>AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit b
isoform 1 pr protein.
Length = 256
Score = 85.0 bits (201), Expect = 3e-16
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Frame = -2
Query: 678 GKVRLGFIPEEWFHXSXXXXXXXXXXXXVWXWQHTCAAKEIYVMEHEYYSGLSLL-VMVY 502
GKVR G IPEE+F +KEIYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY 111
Query: 501 VAHVKFGPKLAAWLDQGXXXXXXXXXXXXEPNRESTGGRNRGREDGAVARARDXXXXXXX 322
K+GP +A + D+ + + + E A +
Sbjct: 112 GIK-KYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAI-DTEKSQQALVQKRHYLFDV 169
Query: 321 XXXXXXXXXXXXXRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITP 142
RERL Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 170 QRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVGKHVVQSIST 229
Query: 141 DQEKQALDRCIADLASLARK 82
QEK+ + +CIADL LA+K
Sbjct: 230 QQEKETIAKCIADLKLLAKK 249
>BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 81.4 bits (192), Expect = 3e-15
Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Frame = -2
Query: 678 GKVRLGFIPEEWFHXSXXXXXXXXXXXXVWXWQHTCAAKEIYVMEHEYYSGLSLL-VMVY 502
GKVR G IPEE+F +K IYV+ E ++ LS+L VMVY
Sbjct: 52 GKVRYGLIPEEFFQFLYPKTGVTGPYVLGTGLILYALSKGIYVISAETFTALSVLGVMVY 111
Query: 501 VAHVKFGPKLAAWLDQGXXXXXXXXXXXXEPNRESTGGRNRGREDGAVARARDXXXXXXX 322
K+GP +A + D+ + + + E A +
Sbjct: 112 GIK-KYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAI-DTEKSQQALVQKRHYLFDV 169
Query: 321 XXXXXXXXXXXXXRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITP 142
RERL Y EV+ RLDY + N+ RR Q+HM++W+ +V ++I+
Sbjct: 170 QRNNIAMALEVTYRERLYRVYKEVRNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSIST 229
Query: 141 DQEKQALDRCIADLASLARK 82
QEK+ + +CIADL LA+K
Sbjct: 230 QQEKETIAKCIADLKLLAKK 249
Score = 31.9 bits (69), Expect = 2.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 631 HSKTGVTGPYTFGVXLATYLCSQG 560
+ KTGVTGPY G L Y S+G
Sbjct: 68 YPKTGVTGPYVLGTGLILYALSKG 91
>AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 195
Score = 76.2 bits (179), Expect = 1e-13
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Frame = -2
Query: 567 AKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPKLAAWLDQGXXXXXXXXXXXXEPNRESTG 391
+KEIYV+ E ++ LS+L VMVY K+GP +A + D+ + + +
Sbjct: 28 SKEIYVISAETFTALSVLGVMVYGIK-KYGPFVADFADKLNEQKLAQLEEAKQASIQHIQ 86
Query: 390 GRNRGREDGAVARARDXXXXXXXXXXXXXXXXXXXXRERLMYAYSEVKRRLDYQLEKSNV 211
E A + RERL Y EVK RLDY + N+
Sbjct: 87 NAI-DTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNM 145
Query: 210 ERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADLASLARK 82
RR Q+HM++W+ +V ++I+ QEK+ + +CIADL LA+K
Sbjct: 146 MRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADLKLLAKK 188
>L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.51
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSER 65
G+P ++ + G P LD ++ + G + PGE GP L PG AG + ER
Sbjct: 301 GMPGKDGQNGVPG-------LDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGER 351
>BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alpha 3
protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.51
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSER 65
G+P ++ + G P LD ++ + G + PGE GP L PG AG + ER
Sbjct: 301 GMPGKDGQNGVPG-------LDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGER 351
>BC007574-1|AAH07574.1| 561|Homo sapiens Unknown (protein for
IMAGE:3139559) protein.
Length = 561
Score = 34.3 bits (75), Expect = 0.51
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSER 65
G+P ++ + G P LD ++ + G + PGE GP L PG AG + ER
Sbjct: 178 GMPGKDGQNGVPG-------LDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGER 228
>AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha 3
protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.51
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSER 65
G+P ++ + G P LD ++ + G + PGE GP L PG AG + ER
Sbjct: 301 GMPGKDGQNGVPG-------LDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGER 351
>AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.51
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSER 65
G+P ++ + G P LD ++ + G + PGE GP L PG AG + ER
Sbjct: 301 GMPGKDGQNGVPG-------LDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGER 351
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 33.9 bits (74), Expect = 0.67
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 244 ASGLPAREVERGAPS--RPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
A+GLP ERGAP P + E+ G+ PG AGP PG G
Sbjct: 475 ANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDG 528
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 33.9 bits (74), Expect = 0.67
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 244 ASGLPAREVERGAPS--RPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
A+GLP ERGAP P + E+ G+ PG AGP PG G
Sbjct: 475 ANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDG 528
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 33.9 bits (74), Expect = 0.67
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 244 ASGLPAREVERGAPS--RPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
A+GLP ERGAP P + E+ G+ PG AGP PG G
Sbjct: 475 ANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDG 528
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 33.9 bits (74), Expect = 0.67
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 244 ASGLPAREVERGAPS--RPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
A+GLP ERGAP P + E+ G+ PG AGP PG G
Sbjct: 475 ANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDG 528
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G P + RGAP P G +D + + GD PG GP PG+ G
Sbjct: 1264 GPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKG 1313
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain
protein.
Length = 1690
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G P + RGAP P G +D + + GD PG GP PG+ G
Sbjct: 1264 GPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKG 1313
>D17391-1|BAA04214.1| 472|Homo sapiens alpha 4(IV) collagen
protein.
Length = 472
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G P + RGAP P G +D + + GD PG GP PG+ G
Sbjct: 46 GPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKG 95
>BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII,
alpha 1 protein.
Length = 1336
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G A +P + G P R GR D E D G+ PG+ GP PG G
Sbjct: 379 GPALQTVPGPQGPPGPPGRDGTPGR-DGEPGDPGEDGKPGDTGPQGFPGTPGDVG 432
>BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = -1
Query: 283 QGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRG 104
+GE LRGE G P R+ RGAP A G + D+G+ G AGP
Sbjct: 654 KGEKGEPGLRGEI--GNPGRDGARGAPGAVGAPGPAGATG-DRGEAGAAGPAGPAGPRGS 710
Query: 103 PGFAGQ 86
PG G+
Sbjct: 711 PGERGE 716
>BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = -1
Query: 283 QGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRG 104
+GE LRGE G P R+ RGAP A G + D+G+ G AGP
Sbjct: 654 KGEKGEPGLRGEI--GNPGRDGARGAPGAVGAPGPAGATG-DRGEAGAAGPAGPAGPRGS 710
Query: 103 PGFAGQ 86
PG G+
Sbjct: 711 PGERGE 716
>AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen middle
variant protein.
Length = 1516
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G A +P + G P R GR D E D G+ PG+ GP PG G
Sbjct: 559 GPALQTVPGPQGPPGPPGRDGTPGR-DGEPGDPGEDGKPGDTGPQGFPGTPGDVG 612
>AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen long
variant protein.
Length = 1751
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G A +P + G P R GR D E D G+ PG+ GP PG G
Sbjct: 794 GPALQTVPGPQGPPGPPGRDGTPGR-DGEPGDPGEDGKPGDTGPQGFPGTPGDVG 847
>AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen short
variant protein.
Length = 1336
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G A +P + G P R GR D E D G+ PG+ GP PG G
Sbjct: 379 GPALQTVPGPQGPPGPPGRDGTPGR-DGEPGDPGEDGKPGDTGPQGFPGTPGDVG 432
>AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collagen
protein.
Length = 1519
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G A +P + G P R GR D E D G+ PG+ GP PG G
Sbjct: 559 GPALQTVPGPQGPPGPPGRDGTPGR-DGEPGDPGEDGKPGDTGPQGFPGTPGDVG 612
>AL031282-6|CAI20032.1| 783|Homo sapiens cell division cycle 2-like
2 (PITSLRE proteins) protein.
Length = 783
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = -1
Query: 391 RTQSRERR-RSSGARQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASGLPAREVE 215
R + RER+ R Q ++ + + E + EA + AH R +R + + + A
Sbjct: 161 RKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKASHWS 220
Query: 214 RGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHR 107
R P P E+ + GD PGEA P P +
Sbjct: 221 RSPPRPPR-------ERFELGDGRKPGEARPAPAQK 249
>AF080694-3|AAC95298.1| 781|Homo sapiens PITSLRE protein kinase
beta SV6 isoform protein.
Length = 781
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = -1
Query: 391 RTQSRERR-RSSGARQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASGLPAREVE 215
R + RER+ R Q ++ + + E + EA + AH R +R + + + A
Sbjct: 162 RKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKASHWS 221
Query: 214 RGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHR 107
R P P E+ + GD PGEA P P +
Sbjct: 222 RSPPRPPR-------ERFELGDGRKPGEARPAPAQK 250
>AF080683-1|AAC83664.1| 755|Homo sapiens PITSLRE protein kinase
alpha SV9 isoform protein.
Length = 755
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = -1
Query: 391 RTQSRERR-RSSGARQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASGLPAREVE 215
R + RER+ R Q ++ + + E + EA + AH R +R + + + A
Sbjct: 173 RKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKASHWS 232
Query: 214 RGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHR 107
R P P E+ + GD PGEA P P +
Sbjct: 233 RSPPRPPR-------ERFELGDGRKPGEARPAPAQK 261
>AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen
protein.
Length = 1336
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G A +P + G P R GR D E D G+ PG+ GP PG G
Sbjct: 379 GPALQTVPGPQGPPGPPGRDGTPGR-DGEPGDPGEDGKPGDTGPQGFPGTPGDVG 432
>AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen
protein.
Length = 1516
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G A +P + G P R GR D E D G+ PG+ GP PG G
Sbjct: 559 GPALQTVPGPQGPPGPPGRDGTPGR-DGEPGDPGEDGKPGDTGPQGFPGTPGDVG 612
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G P + RGAP P G +D + + GD PG GP PG+ G
Sbjct: 1264 GPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKG 1313
>AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen
protein.
Length = 1186
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = -1
Query: 283 QGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRG 104
+GE LRGE G P R+ RGAP A G + D+G+ G AGP
Sbjct: 474 KGEKGEPGLRGEI--GNPGRDGARGAPGAVGAPGPAGATG-DRGEAGAAGPAGPAGPRGS 530
Query: 103 PGFAGQ 86
PG G+
Sbjct: 531 PGERGE 536
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQE 83
GLP + ERG P P G + G+ PG GP L PG +G+E
Sbjct: 962 GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGRE 1015
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQE 83
GLP + ERG P P G + G+ PG GP L PG +G+E
Sbjct: 962 GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGRE 1015
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQE 83
GLP + ERG P P G + G+ PG GP L PG +G+E
Sbjct: 538 GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGRE 591
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQE 83
GLP + ERG P P G + G+ PG GP L PG +G+E
Sbjct: 962 GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGRE 1015
>AF042498-1|AAC04830.1| 1245|Homo sapiens rod photoreceptor
CNG-channel beta subunit protein.
Length = 1245
Score = 32.7 bits (71), Expect = 1.6
Identities = 25/89 (28%), Positives = 36/89 (40%)
Frame = -1
Query: 397 HWRTQSRERRRSSGARQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASGLPAREV 218
H R + +E A + QEL+ QAK + E + + H EAA+ PA
Sbjct: 1125 HLRARLKELAALEAAAKQQELVEQAKSSQDVKGEEGSAAPDQHTH--PKEAATDPPAPRT 1182
Query: 217 ERGAPSRPEAHGRLDSEQRDQGDHSGPGE 131
P P + S R +G+ GP E
Sbjct: 1183 PPEPPGSPPSSPPPASLGRPEGEEEGPAE 1211
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQE 83
GLP + ERG P P G + G+ PG GP L PG +G+E
Sbjct: 959 GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGRE 1012
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQE 83
GLP + ERG P P G + G+ PG GP L PG +G+E
Sbjct: 965 GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGRE 1018
>AL731557-2|CAI14825.1| 334|Homo sapiens ventral anterior homeobox
1 protein.
Length = 334
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = -1
Query: 241 SGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEV 80
+G A A + P G G GPG AGPG LH G AG +
Sbjct: 219 AGAAAGSAAAAAAAAPGPAGAASPHPPAVGGAPGPGPAGPGGLHAGAPAAGHSL 272
>V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA
encoding Pro-alpha-2 chain of type I procollagen. (major
part). ).
Length = 740
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -1
Query: 241 SGLPAREVERGAPSRPEAHGR--LDSEQRDQGDHSGPGEAG-PGPLHRGPGFAGQE 83
+G P G P P G+ L + DQG PGE G PGP PGFAG++
Sbjct: 173 TGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPAGRPGEVGAPGP----PGFAGEK 224
>M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein.
Length = 675
Score = 31.9 bits (69), Expect = 2.7
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGR-LDSEQRDQGDHSGPGEAG----PGPLHRGPGF 95
GE G P G P P G+ ++ + D+G PGEAG PGP+ PGF
Sbjct: 593 GEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL-PGF 649
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -1
Query: 217 ERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 83
ERG P P G S+ D GD+ PG+AGP PG AG +
Sbjct: 17 ERGPPGPPGPPGVPGSDGID-GDNGPPGKAGPPGPKGEPGKAGPD 60
>AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha 2
protein.
Length = 689
Score = 31.9 bits (69), Expect = 2.7
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGR-LDSEQRDQGDHSGPGEAG----PGPLHRGPGF 95
GE G P G P P G+ ++ + D+G PGEAG PGP+ PGF
Sbjct: 607 GEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL-PGF 663
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -1
Query: 217 ERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 83
ERG P P G S+ D GD+ PG+AGP PG AG +
Sbjct: 31 ERGPPGPPGPPGVPGSDGID-GDNGPPGKAGPPGPKGEPGKAGPD 74
>AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha 2
chain protein.
Length = 689
Score = 31.9 bits (69), Expect = 2.7
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGR-LDSEQRDQGDHSGPGEAG----PGPLHRGPGF 95
GE G P G P P G+ ++ + D+G PGEAG PGP+ PGF
Sbjct: 607 GEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL-PGF 663
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -1
Query: 217 ERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 83
ERG P P G S+ D GD+ PG+AGP PG AG +
Sbjct: 31 ERGPPGPPGPPGVPGSDGID-GDNGPPGKAGPPGPKGEPGKAGPD 74
>AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collagen
precursor variant protein.
Length = 1027
Score = 31.9 bits (69), Expect = 2.7
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRG--PGFAGQE 83
G+A GLP + E+GAP G L E +GD PG G G R PG G++
Sbjct: 938 GQAVVGLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGED 995
Query: 82 VNGSER 65
V+ R
Sbjct: 996 VSPGPR 1001
>M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein.
Length = 625
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = -1
Query: 280 GEAHVRLLRG-EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRG 104
G A + RG A G P G P P A G L G PGE GP
Sbjct: 476 GSATAKGERGFPGADGRPGSPGRAGNPGTPGAPG-LKGSPGLPGPRGDPGERGPRGPKGE 534
Query: 103 PGFAGQEVNG 74
PG GQ + G
Sbjct: 535 PGAPGQVIGG 544
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = -1
Query: 280 GEAHVRLLRG-EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRG 104
G A + RG A G P G P P A G L G PGE GP
Sbjct: 1290 GSATAKGERGFPGADGRPGSPGRAGNPGTPGAPG-LKGSPGLPGPRGDPGERGPRGPKGE 1348
Query: 103 PGFAGQEVNG 74
PG GQ + G
Sbjct: 1349 PGAPGQVIGG 1358
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = -1
Query: 280 GEAHVRLLRG-EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRG 104
G A + RG A G P G P P A G L G PGE GP
Sbjct: 1290 GSATAKGERGFPGADGRPGSPGRAGNPGTPGAPG-LKGSPGLPGPRGDPGERGPRGPKGE 1348
Query: 103 PGFAGQEVNG 74
PG GQ + G
Sbjct: 1349 PGAPGQVIGG 1358
>BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein.
Length = 854
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -1
Query: 241 SGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
+G P E G P +P G + +QG PGE G L PGF G
Sbjct: 15 NGEPGERGEDGLPGKPGLRGEIG----EQGLAGRPGEKGEAGLPGAPGFPG 61
Score = 31.1 bits (67), Expect = 4.7
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSER 65
GLP + ++G P +P GR +G GEAGP L PG AG + + ER
Sbjct: 354 GLPGFKGDKGVPGKP---GR-------EGTEGKKGEAGPPGLPGPPGIAGPQGSQGER 401
>AL050341-5|CAI20432.1| 225|Homo sapiens collagen type IX alpha 2
protein.
Length = 225
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -1
Query: 217 ERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 83
ERG P P G S+ D GD+ PG+AGP PG AG +
Sbjct: 19 ERGPPGPPGPPGVPGSDGID-GDNGPPGKAGPPGPKGEPGKAGPD 62
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 31.1 bits (67), Expect = 4.7
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 244 ASGLPAREVERGA-PSR-PEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
A+GLP ERGA SR P + E+ G+ PG AGP PG G
Sbjct: 328 ANGLPGAAGERGALGSRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDG 381
>BC043347-1|AAH43347.1| 886|Homo sapiens general transcription
factor IIIC, polypeptide 3, 102kDa protein.
Length = 886
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 352 RQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASG-LPAREVERGAPSRPEAHGRL 176
R+ ++++ + + + L + GEA++R RGE L E+ R AP E L
Sbjct: 130 RETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTL 189
Query: 175 DSEQRDQGD 149
DQGD
Sbjct: 190 AMIYEDQGD 198
>BC012342-1|AAH12342.1| 953|Homo sapiens cylindromatosis (turban
tumor syndrome) protein.
Length = 953
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 591 WXWQHTCAAKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWL 460
W W+H C I E ++ L + YVA VK+G +AWL
Sbjct: 844 WDWRHGC----IPCQNMELFAVLCIETSHYVAFVKYGKDDSAWL 883
>AK090421-1|BAC03402.1| 246|Homo sapiens FLJ00330 protein protein.
Length = 246
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -1
Query: 226 REVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPG 98
R E AP+ P + R S +GD SGPGEA L PG
Sbjct: 11 RYPEAAAPALPTSTLRGTSSPARKGDLSGPGEAAGSRLLAAPG 53
>AJ250014-1|CAB93533.1| 956|Homo sapiens cyld protein.
Length = 956
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 591 WXWQHTCAAKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWL 460
W W+H C I E ++ L + YVA VK+G +AWL
Sbjct: 847 WDWRHGC----IPCQNMELFAVLCIETSHYVAFVKYGKDDSAWL 886
>AF465407-1|AAL73493.1| 413|Homo sapiens transcription factor
IIIC102 short isoform protein.
Length = 413
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 352 RQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASG-LPAREVERGAPSRPEAHGRL 176
R+ ++++ + + + L + GEA++R RGE L E+ R AP E L
Sbjct: 130 RETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTL 189
Query: 175 DSEQRDQGD 149
DQGD
Sbjct: 190 AMIYEDQGD 198
>AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII collagen
protein.
Length = 1626
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G P E G P +P G + +QG PGE G L PGF G
Sbjct: 768 GEPGERGEDGLPGKPGLRGEIG----EQGLAGRPGEKGEAGLPGAPGFPG 813
Score = 31.1 bits (67), Expect = 4.7
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSER 65
GLP + ++G P +P GR +G GEAGP L PG AG + + ER
Sbjct: 1126 GLPGFKGDKGVPGKP---GR-------EGTEGKKGEAGPPGLPGPPGIAGPQGSQGER 1173
>AF133123-1|AAD41475.1| 886|Homo sapiens transcription factor
IIIC102 protein.
Length = 886
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 352 RQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASG-LPAREVERGAPSRPEAHGRL 176
R+ ++++ + + + L + GEA++R RGE L E+ R AP E L
Sbjct: 130 RETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTL 189
Query: 175 DSEQRDQGD 149
DQGD
Sbjct: 190 AMIYEDQGD 198
>AC012486-1|AAX88853.1| 886|Homo sapiens unknown protein.
Length = 886
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 352 RQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASG-LPAREVERGAPSRPEAHGRL 176
R+ ++++ + + + L + GEA++R RGE L E+ R AP E L
Sbjct: 130 RETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTL 189
Query: 175 DSEQRDQGD 149
DQGD
Sbjct: 190 AMIYEDQGD 198
>AB020656-1|BAA74872.2| 960|Homo sapiens KIAA0849 protein protein.
Length = 960
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 591 WXWQHTCAAKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWL 460
W W+H C I E ++ L + YVA VK+G +AWL
Sbjct: 851 WDWRHGC----IPCQNMELFAVLCIETSHYVAFVKYGKDDSAWL 890
>X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for
alpha-1 type II collagen. ).
Length = 1418
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQE 83
GLP + ERG P P G + GD PG GP L G G+E
Sbjct: 915 GLPGQRGERGFPGLPGPSGEPGQQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 968
>X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (714
AA) protein.
Length = 714
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQE 83
GLP + ERG P P G + GD PG GP L G G+E
Sbjct: 484 GLPGQRGERGFPGLPGPSGEPGQQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 537
>S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1
chain protein.
Length = 1186
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -1
Query: 241 SGLPAREVERGAPS--RPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
SGLP G P P LD + G PG AGP L PGF G+
Sbjct: 776 SGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGK 829
>M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen
protein.
Length = 1603
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -1
Query: 241 SGLPAREVERGAPS--RPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
SGLP G P P LD + G PG AGP L PGF G+
Sbjct: 1193 SGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGK 1246
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQE 83
GLP + ERG P P G + GD PG GP L G G+E
Sbjct: 984 GLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1037
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQE 83
GLP + ERG P P G + GD PG GP L G G+E
Sbjct: 984 GLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1037
>AY923834-1|AAY17361.1| 2108|Homo sapiens kinesin family member 26B
protein.
Length = 2108
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = -1
Query: 394 WRTQSRERRRSSGARQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASGLPAREVE 215
W TQS R RSSG L + + + LLQ A +G EA G A +
Sbjct: 1782 WSTQSLSRNRSSGLASKLPLRAVSGRISELLQGGAGARGLQLRAGPEAEARGGALAEDEP 1841
Query: 214 RGAPSRPEAHGRLDSEQRDQGDHSGPG 134
A P + ++ +R SG G
Sbjct: 1842 AAAHLLPSPYSKITPPRRPHRCSSGHG 1868
>AK026080-1|BAB15353.1| 863|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22427 fis, clone HRC09013. ).
Length = 863
Score = 30.7 bits (66), Expect = 6.3
Identities = 26/98 (26%), Positives = 40/98 (40%)
Frame = -1
Query: 379 RERRRSSGARQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASGLPAREVERGAPS 200
R+RR GA +G + K+ + + + H R+L + A G R G +
Sbjct: 347 RKRRAPHGAEEGTA--VPPKRPYGTQRTPSTASAKTHARVLSMDGAGGDVLRPPLAGCKA 404
Query: 199 RPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
EA ++ EQ P EA GP PG+ G+
Sbjct: 405 ELEA--QVGVEQAASEPVVLPAEARRGPAANQPGWRGE 440
>AK001019-1|BAA91469.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10157 fis, clone HEMBA1003461. ).
Length = 406
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = -1
Query: 394 WRTQSRERRRSSGARQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASGLPAREVE 215
W TQS R RSSG L + + + LLQ A +G EA G A +
Sbjct: 80 WSTQSLSRNRSSGLASKLPLRAVSGRISELLQGGAGARGLQLRAGPEAEARGGALAEDEP 139
Query: 214 RGAPSRPEAHGRLDSEQRDQGDHSGPG 134
A P + ++ +R SG G
Sbjct: 140 AAAHLLPSPYSKITPPRRPHRCSSGHG 166
>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
precursor variant protein.
Length = 1463
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -1
Query: 241 SGLPAREVERGAPS--RPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
SGLP G P P LD + G PG AGP L PGF G+
Sbjct: 1053 SGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGK 1106
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 30.3 bits (65), Expect = 8.3
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Frame = -1
Query: 349 QGQELLIQAKKENVLLQLEAAXQGEAHVRLLRG-EAASGLPAREVERGAPSRPEAHGRLD 173
QG L K E + + + G+ +R G + G+P +G P P+ L
Sbjct: 531 QGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPG-PKGELALS 589
Query: 172 SEQRDQG---DHSGPGEAGPGPLHRGPGFAGQ 86
E+ DQG D PG GP PG+ Q
Sbjct: 590 GEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQ 621
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,453,808
Number of Sequences: 237096
Number of extensions: 2476377
Number of successful extensions: 11895
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 10333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11808
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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