Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_I16
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 34 0.13
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 33 0.31
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.41
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 32 0.54
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 32 0.54
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 31 0.71
AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen prot... 31 0.71
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 31 0.94
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 31 0.94
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 31 0.94
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 31 0.94
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 31 0.94
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 31 0.94
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 31 1.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 1.2
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 30 1.6
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 30 1.6
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 30 1.6
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 30 2.2
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 30 2.2
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 30 2.2
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 30 2.2
U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter... 29 2.9
U00051-12|AAU05571.1| 659|Caenorhabditis elegans Hypothetical p... 29 2.9
U00051-11|AAM29695.1| 683|Caenorhabditis elegans Hypothetical p... 29 2.9
U00051-10|AAM29694.1| 657|Caenorhabditis elegans Hypothetical p... 29 2.9
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 29 2.9
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 3.8
AL032632-7|CAA21586.1| 313|Caenorhabditis elegans Hypothetical ... 29 3.8
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 29 5.0
U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 29 5.0
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 29 5.0
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 29 5.0
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 6.6
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 6.6
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 6.6
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 6.6
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 28 6.6
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 6.6
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 28 6.6
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 28 6.6
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 28 6.6
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 28 6.6
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 28 8.8
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 28 8.8
AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical... 28 8.8
AL021497-19|CAA16406.2| 989|Caenorhabditis elegans Hypothetical... 28 8.8
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 28 8.8
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = -1
Query: 271 HVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHR--GP 101
H + + GEA G P R+ E G P G + G+ PG+ G PGP + P
Sbjct: 242 HGKTIAGEAPPGPPGRQGEMGPQGPPGPPGPRGKDGAG-GEKGAPGDQGNPGPYGKPGQP 300
Query: 100 GFAGQEVNGSERYLC 56
G G + + E+ C
Sbjct: 301 GAPGPDGSAGEKGGC 315
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 250 EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGP 101
+AA G P + +G P P A +S++ +G+ PGE GP P GP
Sbjct: 177 DAAPGEPGPKGPKGPPGAPGAPEHQESQECPRGEPLIPGEPGP-PGEAGP 225
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -1
Query: 250 EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
+ ASG P + GAP +P A + +S G G GP PG GQ
Sbjct: 191 KGASGAPGNPGQAGAPGQPGADAQSESIPGAPGQAGPQGPPGPAGSPGAPGGPGQ 245
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 31.9 bits (69), Expect = 0.54
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -1
Query: 250 EAASGLPAREVER-----GAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGP 101
E +G P +VE GA P A G +Q +QGD G AGP P RGP
Sbjct: 252 EGPTGEPGADVEHQIGLPGAKGTPGAPGE-SGDQGEQGDRGATGIAGP-PGERGP 304
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 31.9 bits (69), Expect = 0.54
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -1
Query: 259 LRG-EAASGLPAREVERGAPSRPEAHGRLDSEQRD--QGDHSGPGEAGP-GPLHRGPGFA 92
LRG + G P G P P +G + RD G PG GP GP+ + PGF
Sbjct: 164 LRGPDGHPGHPGNPGYGGEPGAPGNNGEPGDKGRDGSHGTKGAPGPQGPSGPVGQ-PGFP 222
Query: 91 GQEVN 77
GQ N
Sbjct: 223 GQPGN 227
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/55 (38%), Positives = 23/55 (41%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNG 74
G P R+ +GAP A GRL QG PG GP PG GQ G
Sbjct: 231 GRPGRDGMKGAPG---ARGRLIPVPGPQGAPGKPGPIGPPGPKGNPGPDGQSYQG 282
>AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen protein
88 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -1
Query: 250 EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGS 71
+ +G P + + G+P P G+ QGD PG G PG GQ NG+
Sbjct: 150 DGPAGAPGADGQAGSPGAPGQDGQPGGPGA-QGDAGAPGNDGTPGQDGAPGQNGQRGNGA 208
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPG 98
G P + ERGA P HG +Q G PG AG PGP G G
Sbjct: 725 GAPGHQGERGADGAPGLHGS-RGDQGLPGPPGMPGLAGPPGPPGSGTG 771
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -3
Query: 422 EGRNQTVKALEDAIEGEKT--EQWRAPGTGAP 333
EG Q +K ++DA +G + EQW A G+G P
Sbjct: 214 EGAIQELKLIDDATQGSRQCDEQWGAEGSGTP 245
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPG 98
G P + ERGA P HG +Q G PG AG PGP G G
Sbjct: 328 GAPGHQGERGADGAPGLHGS-RGDQGLPGPPGMPGLAGPPGPPGSGTG 374
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -3
Query: 422 EGRNQTVKALEDAIEGEKT--EQWRAPGTGAP 333
EG Q +K ++DA +G + EQW A G+G P
Sbjct: 574 EGAIQELKLIDDATQGSRQCDEQWGAEGSGTP 605
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPG 98
G P + ERGA P HG +Q G PG AG PGP G G
Sbjct: 688 GAPGHQGERGADGAPGLHGS-RGDQGLPGPPGMPGLAGPPGPPGSGTG 734
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPG 98
G P + ERGA P HG +Q G PG AG PGP G G
Sbjct: 200 GAPGHQGERGADGAPGLHGS-RGDQGLPGPPGMPGLAGPPGPPGSGTG 246
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPG 98
G P + ERGA P HG +Q G PG AG PGP G G
Sbjct: 725 GAPGHQGERGADGAPGLHGS-RGDQGLPGPPGMPGLAGPPGPPGSGTG 771
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -3
Query: 422 EGRNQTVKALEDAIEGEKT--EQWRAPGTGAP 333
EG Q +K ++DA +G + EQW A G+G P
Sbjct: 214 EGAIQELKLIDDATQGSRQCDEQWGAEGSGTP 245
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPG 98
G P + ERGA P HG +Q G PG AG PGP G G
Sbjct: 328 GAPGHQGERGADGAPGLHGS-RGDQGLPGPPGMPGLAGPPGPPGSGTG 374
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -3
Query: 422 EGRNQTVKALEDAIEGEKT--EQWRAPGTGAP 333
EG Q +K ++DA +G + EQW A G+G P
Sbjct: 574 EGAIQELKLIDDATQGSRQCDEQWGAEGSGTP 605
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPG 98
G P + ERGA P HG +Q G PG AG PGP G G
Sbjct: 688 GAPGHQGERGADGAPGLHGS-RGDQGLPGPPGMPGLAGPPGPPGSGTG 734
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPG 98
G P + ERGA P HG +Q G PG AG PGP G G
Sbjct: 200 GAPGHQGERGADGAPGLHGS-RGDQGLPGPPGMPGLAGPPGPPGSGTG 246
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -3
Query: 422 EGRNQTVKALEDAIEGEKT--EQWRAPGTGAP 333
EG Q +K ++DA +G + EQW A G+G P
Sbjct: 214 EGAIQELKLIDDATQGSRQCDEQWGAEGSGTP 245
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPG 98
G P + ERGA P HG +Q G PG AG PGP G G
Sbjct: 328 GAPGHQGERGADGAPGLHGS-RGDQGLPGPPGMPGLAGPPGPPGSGTG 374
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -3
Query: 422 EGRNQTVKALEDAIEGEKT--EQWRAPGTGAP 333
EG Q +K ++DA +G + EQW A G+G P
Sbjct: 553 EGAIQELKLIDDATQGSRQCDEQWGAEGSGTP 584
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPG 98
G P + ERGA P HG +Q G PG AG PGP G G
Sbjct: 667 GAPGHQGERGADGAPGLHGS-RGDQGLPGPPGMPGLAGPPGPPGSGTG 713
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/55 (38%), Positives = 23/55 (41%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNG 74
G P R+ +GAP A GRL QG PG GP PG GQ G
Sbjct: 231 GRPGRDGMKGAPG---AAGRLIPVPGPQGAPGKPGPIGPPGPKGNPGPDGQSYQG 282
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRD-QGDHSGPGEAGPGPLHRGPGFAGQEVN 77
G A G P + G+P +P A G+ ++ QG S PG GP PG G
Sbjct: 216 GVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGG 275
Query: 76 G 74
G
Sbjct: 276 G 276
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = -1
Query: 250 EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
+ A G P + GAP +P + + +S G G GP PG GQ
Sbjct: 191 KGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGPGQ 245
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = -1
Query: 250 EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
+ A G P + GAP +P + + +S G G GP PG GQ
Sbjct: 191 KGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGPGQ 245
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = -1
Query: 250 EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
+ A G P + GAP +P + + +S G G GP PG GQ
Sbjct: 191 KGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGPGQ 245
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGP 116
G P + + G P P A G + QG PG AG PGP
Sbjct: 211 GGPGNDGQPGGPGNPGAPGAVTEVPGQQGPPGPPGPAGPPGP 252
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = -1
Query: 244 ASGLPAREVERGAPSRPEAHGRLD--SEQRDQGDHSGPGEAGPGPLHRG-PGFAGQEVNG 74
A G P + GAP + G Q GD PG+AG P H G PG GQ G
Sbjct: 141 APGAPGPQGPSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQAG-APGHPGAPGQGGQRSRG 199
Query: 73 S 71
+
Sbjct: 200 T 200
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -1
Query: 217 ERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
+ GAP P A G+ QR +G G GP GPG GQ
Sbjct: 180 QAGAPGHPGAPGQ--GGQRSRGTPGPSGAPGPQGPAGGPGQPGQ 221
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPG--PLHRG-PGFAG 89
G A G P + G P +P G+ + S PG+ GP P RG PG AG
Sbjct: 186 GSGAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQPGPRGPPGQAG 243
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = -1
Query: 250 EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
+ A G P + G P + G SE G + PG GP PG GQ
Sbjct: 196 KGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQPGPRGPPGQAGSPGGNGQ 250
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRP---EAHGRLDSEQRDQGDHSGPGEAGP-GP 116
G A G + +RGAP P + GR + + Q + PG+AGP GP
Sbjct: 186 GSGAPGPAGPKGQRGAPGHPGQAGSPGRPGVDAQSQSNPGAPGQAGPQGP 235
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = -1
Query: 232 PAREVERGAPSRPEAHGRLDSE-QRDQGDHSG-PGEAGPGPLHRGPGFAGQ 86
P + GAP P G + Q G SG PG AGP PG GQ
Sbjct: 157 PCPQGPPGAPGSPGPQGNAGAPGQPGHGGGSGAPGPAGPKGQRGAPGHPGQ 207
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -1
Query: 241 SGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 83
+G P + GAP +P A G+ + G PG AGP GF GQ+
Sbjct: 207 NGQPGFPGQDGAPGQPGADGQRGAGT--PGAPGAPGNAGPAGPSGQDGFPGQD 257
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -1
Query: 241 SGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 83
+G P + GAP +P A G+ + G PG AGP GF GQ+
Sbjct: 191 NGQPGFPGQDGAPGQPGADGQRGAGT--PGAPGAPGNAGPAGPSGQDGFPGQD 241
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRG-PGFAGQ 86
G P R+ G P +P G RD G+ PG G G RG PG AG+
Sbjct: 173 GQPGRKGNNGRPGQPAPQGNAGHPGRD-GEPGQPGNPGKDGRKGRGHPGTAGR 224
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
G A GL ++ + G P A G++ + QR G PG GP PG G
Sbjct: 200 GPGAPGLGGKDGQSGNAGVPGAPGKITNIQRPAGLPGVPGPIGPVGSAGTPGSPG 254
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 400 KHWRTQSRERRRSSGARQGQELLIQAKKENVLLQLEAAXQ 281
K +S +RR S G R+G+ +L+ + + N + QL +A +
Sbjct: 298 KSMSVKSEQRRSSYGTRRGEAVLVNSIRNNRIPQLRSAVE 337
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -1
Query: 241 SGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSERY 62
+G P + GAP +P H +G + PG G PG AG +G E+
Sbjct: 226 AGPPGPQGPPGAPGQP-GHDGQPGTPGPKGPNGNPGAPGADGNPGTPGVAGVAGSGGEKG 284
Query: 61 LC 56
+C
Sbjct: 285 VC 286
>U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 5 protein.
Length = 284
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = -1
Query: 250 EAASGLPAREVERGAPSRPEAHGRLD--SEQRDQGDHSGPGEAGP----GPLHRG-PGFA 92
E GLP +RG P + GR+ +Q G PG AGP G +G PG A
Sbjct: 154 EGFQGLPGDAGKRGTPGKDGEPGRVGDIGDQGTPGQDGQPGLAGPPGRDGLTGKGQPGVA 213
Query: 91 GQ 86
G+
Sbjct: 214 GR 215
>U00051-12|AAU05571.1| 659|Caenorhabditis elegans Hypothetical
protein F42G9.6c protein.
Length = 659
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGP 101
G+ SG+P +P+ P+ L + + G EA P P R P
Sbjct: 532 GDELSGVPRISASPDSPTTPDIESALLTRRNSYGASDPTSEASPTPPQRNP 582
>U00051-11|AAM29695.1| 683|Caenorhabditis elegans Hypothetical
protein F42G9.6b protein.
Length = 683
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGP 101
G+ SG+P +P+ P+ L + + G EA P P R P
Sbjct: 556 GDELSGVPRISASPDSPTTPDIESALLTRRNSYGASDPTSEASPTPPQRNP 606
>U00051-10|AAM29694.1| 657|Caenorhabditis elegans Hypothetical
protein F42G9.6a protein.
Length = 657
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGP 101
G+ SG+P +P+ P+ L + + G EA P P R P
Sbjct: 530 GDELSGVPRISASPDSPTTPDIESALLTRRNSYGASDPTSEASPTPPQRNP 580
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -1
Query: 250 EAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGS 71
+ +G P + + GAP G +QGD G+ G GPG GQ +G+
Sbjct: 145 DGPAGAPGADGQPGAPGNAGQDGA-PGAAGEQGDAGAAGQDGEAGAPGGPGKNGQRGSGA 203
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 244 ASGLPAREVERGAPSRP--EAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPGFAGQ 86
+ G P R+ E GAP +P + G Q++ P G PGP PG AGQ
Sbjct: 160 SDGQPGRDGEAGAPGQPGRDGAGGYGGPQQNDCQTCAPARQGAPGP----PGPAGQ 211
>AL032632-7|CAA21586.1| 313|Caenorhabditis elegans Hypothetical
protein Y11D7A.11 protein.
Length = 313
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 83
G P + ERG GR + + PG+AGP L PG G +
Sbjct: 202 GRPGEQGERGPNGEDGRPGRRGDDGMPGTVNEIPGQAGPPGLRGAPGATGSQ 253
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = -1
Query: 244 ASGLPAREVERGAPSRP---EAHGRLDSEQRDQGDHSGPGEAGPGPLHRG-PGFAGQEVN 77
A G P + GAP + E G Q GD PG+AG P H G PG GQ
Sbjct: 141 APGAPGPQGPSGAPGQDAVGEGPGPA-GPQGPAGDAGAPGQAG-APGHPGAPGQGGQRSR 198
Query: 76 GS 71
G+
Sbjct: 199 GT 200
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -1
Query: 217 ERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
+ GAP P A G+ QR +G G GP GPG GQ
Sbjct: 180 QAGAPGHPGAPGQ--GGQRSRGTPGPAGAPGPQGPAGGPGQPGQ 221
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 258 SEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAIT-PDQEKQALDRCIADLASLA 88
+E+KRR++Y E + R + ++ I +V K ++ D +++ L I L +A
Sbjct: 243 NEIKRRIEYLKETEETKARFERDQLLKLINDSVEKQVSQKDFQEKFLQNAIQQLKGIA 300
>U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical
protein F57F4.2 protein.
Length = 327
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -1
Query: 217 ERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNG 74
+ G + +L D G + G GE GPG L+R GQE G
Sbjct: 61 KNGGDDDGTGYQKLKKGGEDDGGY-GEGEGGPGKLYRAKKDDGQEKKG 107
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRD-QGDHSGP-GEAGPGPLHRGPGFAGQEV 80
G G R G P P G +E R Q +GP G GP PG AG++
Sbjct: 175 GPGEQGDAGRPGAAGCPGPPGPRGEPGTEYRPGQAGRAGPPGPRGPPGPEGNPGGAGEDG 234
Query: 79 N 77
N
Sbjct: 235 N 235
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = -1
Query: 241 SGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
+G P + G P A G D + G GPGE GP PG AG
Sbjct: 143 AGPPGPDGCAGEPGTDGAPGE-DGQNGAPGSPGGPGETGPQGHQGKPGRAG 192
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 199 RPEAHGRLDSEQRDQGDHSGPGEAGPGPLH 110
RP A G +DS ++ DH G E P+H
Sbjct: 1918 RPSAEGSIDSSGFEKVDHEGLDEFAAPPVH 1947
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 199 RPEAHGRLDSEQRDQGDHSGPGEAGPGPLH 110
RP A G +DS ++ DH G E P+H
Sbjct: 31 RPSAEGSIDSSGFEKVDHEGLDEFAAPPVH 60
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 199 RPEAHGRLDSEQRDQGDHSGPGEAGPGPLH 110
RP A G +DS ++ DH G E P+H
Sbjct: 1918 RPSAEGSIDSSGFEKVDHEGLDEFAAPPVH 1947
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 199 RPEAHGRLDSEQRDQGDHSGPGEAGPGPLH 110
RP A G +DS ++ DH G E P+H
Sbjct: 1918 RPSAEGSIDSSGFEKVDHEGLDEFAAPPVH 1947
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 77
G+P + E G P P G +GD PG++G L PG+ G + N
Sbjct: 905 GVPGMKGEDGLPGLPGVTGL-------KGDLGAPGQSGAPGLPGAPGYPGMKGN 951
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 77
G+P + E G P P G +GD PG++G L PG+ G + N
Sbjct: 904 GVPGMKGEDGLPGLPGVTGL-------KGDLGAPGQSGAPGLPGAPGYPGMKGN 950
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 77
G+P + E G P P G +GD PG++G L PG+ G + N
Sbjct: 904 GVPGMKGEDGLPGLPGVTGL-------KGDLGAPGQSGAPGLPGAPGYPGMKGN 950
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 77
G+P + E G P P G +GD PG++G L PG+ G + N
Sbjct: 905 GVPGMKGEDGLPGLPGVTGL-------KGDLGAPGQSGAPGLPGAPGYPGMKGN 951
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRLDSEQRD-QGDHSGP-GEAGPGPLHRGPGFAGQEV 80
G G R G P P G +E R Q +GP G GP PG AG++
Sbjct: 175 GPGEQGDAGRPGAAGRPGPPGPRGEPGTEYRPGQAGRAGPPGPRGPPGPEGNPGGAGEDG 234
Query: 79 N 77
N
Sbjct: 235 N 235
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 77
G+P + E G P P G +GD PG++G L PG+ G + N
Sbjct: 941 GVPGMKGEDGLPGLPGVTGL-------KGDLGAPGQSGAPGLPGAPGYPGMKGN 987
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -1
Query: 241 SGLPAREVERGAPSRP-EAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSE 68
+G P GAP P +A L QGD PG+ G PG G+ +GSE
Sbjct: 280 AGPPGPPGPSGAPGHPGQAGSSLPGAPGPQGDAGAPGQPGAPGQQGEPGEDGE--SGSE 336
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRPEAHGRL-----DSEQRDQG--DHSGPGEAGPG 119
G + G P + + GAP +P A G+ D E +G DH P PG
Sbjct: 299 GSSLPGAPGPQGDAGAPGQPGAPGQQGEPGEDGESGSEGACDHCPPPRTAPG 350
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 253 GEAASGLPAREVERGAPSRP---EAHGRLDSEQRDQGDHSGPGEAGP-GPLHRGPGFAG 89
G A G + +RGAP P A G+ + + Q PG+AGP GP PG +G
Sbjct: 165 GFGAPGPAGPKGQRGAPGHPGQAGAPGQPGVDAQSQSTPGAPGQAGPQGP----PGSSG 219
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -1
Query: 211 GAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSERYLC 56
GAP P G +G PG+ G PG GQ ER +C
Sbjct: 219 GAPGAPGGPG-FPGAPGSKGPSGAPGQPGANGNPGAPGQPGQSGGSGERGIC 269
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGR-LDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
G P + GAP + G+ SE G+ PGEAGP PG GQ
Sbjct: 185 GPPGVNGQPGAPGQDGNPGQDAPSEPLVPGEPGAPGEAGPQGPPGQPGTPGQ 236
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGR-LDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 86
G P + G P G +D E G PG GP LH PG G+
Sbjct: 247 GPPGPKGRTGEQGPPGLDGETIDGEDGSPGLPGPPGPPGPPGLHGSPGSYGE 298
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 154 GDHSGPGEAGPGPLHRGPGFAGQ 86
GD +GPGEAGP PG GQ
Sbjct: 139 GDAAGPGEAGPAGPAGPPGPDGQ 161
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 211 GAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGP-GFAGQ 86
G P +P +G+ S+ + D G G+ PGP +GP G GQ
Sbjct: 147 GPPGQPGQNGQRGSDGQPGQDAMGGGQGAPGP--QGPAGDNGQ 187
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 241 SGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGP-GFAGQEVNGS 71
+G P + + G P P G + G +GPG AGP P GP G GQ +GS
Sbjct: 206 AGPPGNDGQPGQPGGPGQDGASSA-----GGEAGPGPAGP-PGPAGPAGPDGQSGSGS 257
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = -1
Query: 259 LRGEAA-SGLPAREVERGAPSRPEAHGRL--DSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
L+GE+ GLP R+ G P +P G D G PG+ G PG G
Sbjct: 854 LKGESGLPGLPGRQGNDGIPGQPGLEGECGEDGFPGSPGQPGYPGQQGREGEKGYPGIPG 913
Query: 88 Q 86
+
Sbjct: 914 E 914
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = -1
Query: 259 LRGEAA-SGLPAREVERGAPSRPEAHGRL--DSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
L+GE+ GLP R+ G P +P G D G PG+ G PG G
Sbjct: 1111 LKGESGLPGLPGRQGNDGIPGQPGLEGECGEDGFPGSPGQPGYPGQQGREGEKGYPGIPG 1170
Query: 88 Q 86
+
Sbjct: 1171 E 1171
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = -1
Query: 259 LRGEAA-SGLPAREVERGAPSRPEAHGRL--DSEQRDQGDHSGPGEAGPGPLHRGPGFAG 89
L+GE+ GLP R+ G P +P G D G PG+ G PG G
Sbjct: 1110 LKGESGLPGLPGRQGNDGIPGQPGLEGECGEDGFPGSPGQPGYPGQQGREGEKGYPGIPG 1169
Query: 88 Q 86
+
Sbjct: 1170 E 1170
>AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical
protein Y51A2D.7b protein.
Length = 1057
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 337 LLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASGLPARE 221
+L++ + V+ QL A H+ +LRG+ GLPA +
Sbjct: 976 MLVEIWRFFVVRQLNTATIDTYHMEILRGDVDEGLPAEK 1014
>AL021497-19|CAA16406.2| 989|Caenorhabditis elegans Hypothetical
protein Y51A2D.7a protein.
Length = 989
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 337 LLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASGLPARE 221
+L++ + V+ QL A H+ +LRG+ GLPA +
Sbjct: 908 MLVEIWRFFVVRQLNTATIDTYHMEILRGDVDEGLPAEK 946
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -1
Query: 238 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG-PGP--LHRGPGFAGQE 83
G P + + G P G+ D QG PG G PGP L PG GQ+
Sbjct: 209 GEPGEDGDPGQPGDNGEPGKCDEVNVAQGPPGSPGPPGLPGPDGLPGTPGNPGQD 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,272,945
Number of Sequences: 27780
Number of extensions: 336042
Number of successful extensions: 1449
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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