Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_I15
(830 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 202 6e-53
SPAC25B8.06c |||serine-tRNA ligase|Schizosaccharomyces pombe|chr... 138 1e-33
SPAPB24D3.01 ||SPAPB2C8.02|transcription factor |Schizosaccharom... 30 0.35
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 29 0.61
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 29 1.1
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.4
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 28 1.4
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 27 2.5
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 26 7.5
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 7.5
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 26 7.5
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 25 10.0
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 202 bits (492), Expect = 6e-53
Identities = 95/159 (59%), Positives = 116/159 (72%)
Frame = -3
Query: 735 PIKYADSPHASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEE 556
P+KYA +E GSHGRD GIFRVH FEK+EQFVLT P SW+ EMIN+AE+
Sbjct: 260 PLKYAGYSTCYRREAGSHGRDAWGIFRVHAFEKIEQFVLTDPEK--SWEAFTEMINHAED 317
Query: 555 FCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRY 376
F K+L LPYR+V IVSGALN+AA+KK DLEAWFP G ++ELVSCSNC +YQ+R L +R
Sbjct: 318 FYKSLELPYRIVAIVSGALNNAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRNLEIRC 377
Query: 375 GQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDG 259
G K + +YVH LN+T+CAT R +C ILE +QT DG
Sbjct: 378 GVKKMGDREKKYVHCLNSTLCATERALCCILENYQTPDG 416
>SPAC25B8.06c |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 454
Score = 138 bits (333), Expect = 1e-33
Identities = 68/150 (45%), Positives = 97/150 (64%)
Frame = -3
Query: 708 ASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPY 529
A +E G+ G++ RG++R+H+F KVE F T H + S +M +E++N +EF + L +P
Sbjct: 290 AYRREAGARGKENRGLYRLHEFTKVELFAWT--HPSRSSEMFNEIVNFQKEFVETLKIPA 347
Query: 528 RVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAA 349
R++N+ + L +AS+K D+EAW P ++ E+ S SNCLEYQARRLL RY K
Sbjct: 348 RILNMPTAELGSSASQKYDIEAWMPARQSYGEITSASNCLEYQARRLLTRYRNDKD---- 403
Query: 348 TEYVHMLNATMCATTRVICAILEVHQTEDG 259
+ +VH LN T A R+I AILE HQ EDG
Sbjct: 404 SGFVHTLNGTAAAIPRLIIAILENHQQEDG 433
>SPAPB24D3.01 ||SPAPB2C8.02|transcription factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 594
Score = 30.3 bits (65), Expect = 0.35
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = -3
Query: 438 RELVSCSNCLEYQ-----ARRLLVRYGQTKKMN 355
REL SC NC+ YQ ++RL Y TKK N
Sbjct: 23 RELPSCQNCIVYQEECHYSKRLKRSYSATKKKN 55
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 29.5 bits (63), Expect = 0.61
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 735 PIKYADSPHASEQEVGSHGRDTRGIFRVHQF 643
PI +AD + +EQE G+H D RG R F
Sbjct: 378 PIYFADDTNGAEQEKGAHRLDGRGRKRGKSF 408
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 28.7 bits (61), Expect = 1.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 260 AXKVPEILKPWLPKQYQELIP 198
A + +L+PWLP + QE++P
Sbjct: 288 AVAIVRVLRPWLPSKLQEVLP 308
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 1.4
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +2
Query: 428 TSSLNAPDPGNQASKSSFLEAAWFRAPDTMFTTRYGSPSALQNS-SALFIISSIICQDAL 604
+SSL++ DP ++ SS + P T+ SA S S+ ++ SS + +
Sbjct: 161 SSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSS 220
Query: 605 S*GDVRTNCSTFSN*CTRKIPRVSRP*DPTSCSEACGESA 724
S ++ T S+ T IP S TS S + S+
Sbjct: 221 SPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSS 260
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 334 HAERDHVRHHQGHLRHTRGTPDRGRHXRYRK 242
H E H RH + +R DR RH R+ K
Sbjct: 35 HRESKHGRHDRSERPSSREAGDRSRHERFSK 65
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1811
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -3
Query: 486 SKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRY 376
SKKL+ E W P +F E++ ++ LE +++ L V +
Sbjct: 1394 SKKLEEEYWLPFLLSFNEIICEASDLEVRSKALKVLF 1430
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 492 AASKKLDLEAWFPGSGAFRELV 427
+A+KK ++ W PGSG ++V
Sbjct: 156 SAAKKYGIQFWGPGSGIIHQIV 177
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 7.5
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 428 TSSLNAPDPGNQASKSSFLEAAWFRAPDTMFTTRYGSPSALQNSSALFIISSIICQDALS 607
T + P P + S S + + FTT GSP N+S+ F+ SS+I +LS
Sbjct: 184 TDIVTLPPPASSTSSFSTITNTSMIPSSSSFTTTTGSP--YYNTSS-FLPSSVISSASLS 240
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 749 PESSFPSNMRTLHMLQNK-RLDLMDVTRVVSFEYINLKRWNNL 624
PES FP++ H Q+K L+ R ++ +Y +L R N L
Sbjct: 54 PESGFPTHCNRTHWEQDKIHQSLIPKLRQINEDYHDLARPNPL 96
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 585 SFAKMRYHEEMLEQIVPPFQIDVLERYHACHVHEIQPL 698
+ A R HE+ L + P +D R HA H+++ L
Sbjct: 19 TLADSRIHEQYLVKAFPNEPVDYEGRMHAGHLNQTDQL 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,077,025
Number of Sequences: 5004
Number of extensions: 61041
Number of successful extensions: 180
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 408446760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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