Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_I15
(830 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0031 + 5134889-5135021,5135109-5135179,5135267-5135428,513... 217 7e-57
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 213 1e-55
11_06_0371 + 22774245-22774413,22774504-22774670,22775538-227756... 122 4e-28
07_03_1052 + 23598547-23600181 31 1.1
08_01_0661 - 5708088-5708131,5708217-5710048,5710527-5710625,571... 31 1.5
02_03_0131 - 15576422-15577021 31 1.5
03_02_0702 + 10526895-10526958,10527141-10527284,10528028-105281... 30 2.6
05_05_0290 - 23879064-23880035 29 4.5
12_01_0084 - 678324-679643 29 6.0
11_01_0083 - 629885-631189 29 6.0
>03_02_0031 +
5134889-5135021,5135109-5135179,5135267-5135428,
5135786-5135891,5136385-5136429,5136850-5136946,
5137027-5137210,5137304-5137483,5137567-5137770
Length = 393
Score = 217 bits (531), Expect = 7e-57
Identities = 98/161 (60%), Positives = 124/161 (77%)
Frame = -3
Query: 735 PIKYADSPHASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEE 556
PI+YA +E GSHGRDT GIFRVHQFEK+EQF +TSP+DN SW+M +EMI N+E+
Sbjct: 203 PIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEMIKNSED 262
Query: 555 FCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRY 376
F K +GLPY++V+IVSGALN AA+KK DLEAWFP S +RELVSCSNC ++QARRL + Y
Sbjct: 263 FYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDFQARRLGIGY 322
Query: 375 GQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDGXQ 253
GQ K + ++VHMLN+T+ AT R +C ILE Q E+G +
Sbjct: 323 GQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQRENGVE 363
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 213 bits (521), Expect = 1e-55
Identities = 96/160 (60%), Positives = 123/160 (76%)
Frame = -3
Query: 732 IKYADSPHASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEEF 553
++YA +E GSHGRDT GIFRVHQFEK+EQF +TSP+DN SW+M +EMI N+E+F
Sbjct: 245 MRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEMIKNSEDF 304
Query: 552 CKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYG 373
K +GLPY++V+IVSGALN AA+KK DLEAWFP S +RELVSCSNC ++QARRL + YG
Sbjct: 305 YKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDFQARRLGIGYG 364
Query: 372 QTKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDGXQ 253
Q K + ++VHMLN+T+ AT R +C ILE Q E+G +
Sbjct: 365 QKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKENGVE 404
>11_06_0371 +
22774245-22774413,22774504-22774670,22775538-22775631,
22775723-22775871,22775950-22776042,22776167-22776235,
22776236-22776415,22776465-22776518,22776739-22776905,
22777180-22777314,22777386-22777479,22777567-22777848
Length = 550
Score = 122 bits (294), Expect = 4e-28
Identities = 68/171 (39%), Positives = 95/171 (55%), Gaps = 12/171 (7%)
Frame = -3
Query: 735 PIKYADSPHASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEE 556
P KY H E G+ G TRG++RVHQF KVE FV P + S + +E+I EE
Sbjct: 359 PRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEE--SDKCHEELITIEEE 416
Query: 555 FCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRY 376
+LGL ++ +++ +G L A +K D+EAW PG + E+ S SNC +YQ+RRL +R+
Sbjct: 417 LYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLDRYGEISSASNCTDYQSRRLGIRF 476
Query: 375 GQT------------KKMNAATEYVHMLNATMCATTRVICAILEVHQTEDG 259
+ K + T++VH LNAT A R+I ILE Q EDG
Sbjct: 477 RPSPADPPPANAKKGKGSSGPTQFVHTLNATAVAVPRLIICILENFQQEDG 527
>07_03_1052 + 23598547-23600181
Length = 544
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 412 SGVPSQKIACKVRSDEKDERCH*IRAHAERDHVRHHQGHLRHTRGTPDRG 263
S +PSQ + SD CH RA ++ V HH G H +PD G
Sbjct: 14 SNIPSQNLKQFQYSDNPQHPCHPYRAPSDTHVVPHHYGLKSH---SPDAG 60
>08_01_0661 -
5708088-5708131,5708217-5710048,5710527-5710625,
5711015-5711508,5711579-5711632,5712597-5712683,
5712684-5712776
Length = 900
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Frame = -3
Query: 711 HASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNAS---WQMMDEMINNAEEFCKAL 541
H +GS G F + ++ F L N W+ + + E +CK
Sbjct: 587 HLDRPSLGSKGWYFTFYFSEAALQFIKSFPLPDAKPNCQSGPWEPSFDDLEATENYCKIA 646
Query: 540 GLPYRVVNIVSGALN 496
YRV+ +VSG N
Sbjct: 647 RSAYRVIKVVSGPHN 661
>02_03_0131 - 15576422-15577021
Length = 199
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 331 AERDHVRHHQGHLRHTRGTP--DRGRHXRYRKSS 236
A+R H RH H R +P D GRH R R S
Sbjct: 70 ADRSHRRHSHSHSHRGRSSPSPDAGRHKRRRDGS 103
>03_02_0702 +
10526895-10526958,10527141-10527284,10528028-10528116,
10528246-10528780,10528909-10529076,10529728-10529906,
10530028-10530107,10530205-10530313,10530406-10530507,
10531329-10531403,10531499-10531606,10532395-10532596,
10532765-10533060
Length = 716
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 214 YCLGSQGLRISGTLXAVLCLVYLEYGANDPGGGAHGRVQHVHVFSGSV 357
+ + QG G+L A L + Y ++G + GG G V ++ GSV
Sbjct: 4 HLMSPQGSGSGGSLIATLAVAYSKHGRSLYTGGTDGMVCRINASDGSV 51
>05_05_0290 - 23879064-23880035
Length = 323
Score = 29.1 bits (62), Expect = 4.5
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = -3
Query: 735 PIKYADSPHASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDN-ASWQMMDEMINNAE 559
PI++ S+ E GR+ G R H+ + VL S HD+ A Q D I
Sbjct: 61 PIEHPGETMDSDDEDNDLGREFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSI-LIN 119
Query: 558 EFCKALGLPYRVVNIVSGALNHAASKKLD--LEAWFPGSG 445
F +AL L V++ G + S D LE + G+G
Sbjct: 120 AFNQALALQGSVLDPDEGQGDQGGSTNDDGLLEEYVLGAG 159
>12_01_0084 - 678324-679643
Length = 439
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 401 WYSRQLLQETSSLNAPDPGNQASKSSFLEAAWFR 502
W+SR+L + + P+P + S E+ WFR
Sbjct: 235 WFSRKLQKLLYKIMDPNPSTRISIQKIKESTWFR 268
>11_01_0083 - 629885-631189
Length = 434
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 401 WYSRQLLQETSSLNAPDPGNQASKSSFLEAAWFR 502
W+SR+L + + P+P + S E+ WFR
Sbjct: 235 WFSRKLQKLLYKIMDPNPSTRISIQKIKESTWFR 268
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,829,784
Number of Sequences: 37544
Number of extensions: 443090
Number of successful extensions: 1269
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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