Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_I15
(830 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical pr... 257 6e-69
U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna synt... 102 4e-22
AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA sy... 102 4e-22
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical
protein C47E12.1 protein.
Length = 487
Score = 257 bits (630), Expect = 6e-69
Identities = 118/159 (74%), Positives = 135/159 (84%)
Frame = -3
Query: 735 PIKYADSPHASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEE 556
PIKYA QEVGSHGRDTRGIFRVHQFEK+EQFVL SP+DN SW + DEMI NAE
Sbjct: 291 PIKYAGVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAES 350
Query: 555 FCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRY 376
+ + L +PY+VVNIVSG LN+AA+KK DLEAWFPGSGA+RELVSCSNCL+YQ+RRL VRY
Sbjct: 351 YYQELQIPYQVVNIVSGELNNAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRY 410
Query: 375 GQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDG 259
GQTKK++ +VHMLNATMCATTRVICAILE +QTE+G
Sbjct: 411 GQTKKLSGEVPFVHMLNATMCATTRVICAILENNQTEEG 449
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -1
Query: 251 VPEILKPWLPKQYQELIPFVKPAPID 174
VP ++ W+P+ Y+ IPFVKPAPID
Sbjct: 452 VPTAIQQWMPENYRTFIPFVKPAPID 477
>U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna
synthetase protein 1 protein.
Length = 441
Score = 102 bits (244), Expect = 4e-22
Identities = 56/177 (31%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Frame = -3
Query: 735 PIKYADSPHASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEE 556
PI+ E+ + + ++RVH+F KVE FV+++P +A+ +D ++ +
Sbjct: 260 PIRLVSLSRCFRTEISKSASEAK-LYRVHEFSKVEMFVVSTPEQSAA--ELDYLVEVQKG 316
Query: 555 FCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRY 376
+ALG+ R + + S L +A++K D+EAW PG + E+ S SNC ++Q+RRL ++Y
Sbjct: 317 TFQALGVHCRQLEMPSEELGASAARKFDIEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY 376
Query: 375 GQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDGXQGTGN-PQTLASQAVSR 208
K + T+Y H N T A+TR + ++LE Q + +G G P+ L + R
Sbjct: 377 ---KTADGTTKYAHTCNGTALASTRALISVLETFQND--KKGLGELPEPLRKRVKQR 428
>AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA
synthetase protein.
Length = 441
Score = 102 bits (244), Expect = 4e-22
Identities = 56/177 (31%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Frame = -3
Query: 735 PIKYADSPHASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEE 556
PI+ E+ + + ++RVH+F KVE FV+++P +A+ +D ++ +
Sbjct: 260 PIRLVSLSRCFRTEISKSASEAK-LYRVHEFSKVEMFVVSTPEQSAA--ELDYLVEVQKG 316
Query: 555 FCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRY 376
+ALG+ R + + S L +A++K D+EAW PG + E+ S SNC ++Q+RRL ++Y
Sbjct: 317 TFQALGVHCRQLEMPSEELGASAARKFDIEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY 376
Query: 375 GQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDGXQGTGN-PQTLASQAVSR 208
K + T+Y H N T A+TR + ++LE Q + +G G P+ L + R
Sbjct: 377 ---KTADGTTKYAHTCNGTALASTRALISVLETFQND--KKGLGELPEPLRKRVKQR 428
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical protein
C09F9.2 protein.
Length = 1642
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -3
Query: 735 PIKYADSPHASEQEVGSHGRDTRGIFRVHQFEKVEQFVLTSP 610
PIK A P E + HG++ RG+ V+ FE+VE V + P
Sbjct: 1060 PIKAA--PEFFENAMKYHGKNARGVMTVNFFEEVETSVESRP 1099
>Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical protein
T28D6.4 protein.
Length = 991
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +1
Query: 274 VYLEYGANDPGGGAHGRVQHVHVFSGSVHLFRLTVPYKQSSGLVLQTVTTRDKFPERTGS 453
VYL +GAN AHGR VHV + S + K+ G+ + V + T
Sbjct: 810 VYLGHGANSSDSDAHGRT-CVHVVA-STNDVAAAKMLKRIGGVNFEAVDRGGRTALMTAV 867
Query: 454 W--EPGLQV*LLGSCMV*SSRHD 516
W + V LL SC V +R D
Sbjct: 868 WAKHVAISVFLLDSCGVDPNRTD 890
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 313 AHGRVQHVHVFSGSVHLFRLTVPYKQSSGLVLQTVTTRDKFPERTG 450
AHG + +HVF + L +K+ ++ T D+F ++TG
Sbjct: 147 AHGSARSIHVFKNAPRLAAKRKTFKKWRDILDSRGITFDEFTQKTG 192
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 313 AHGRVQHVHVFSGSVHLFRLTVPYKQSSGLVLQTVTTRDKFPERTG 450
AHG + +HVF + L +K+ ++ T D+F ++TG
Sbjct: 147 AHGSARSIHVFKNAPRLAAKRKTFKKWRDILDSRGITFDEFTQKTG 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,266,140
Number of Sequences: 27780
Number of extensions: 360731
Number of successful extensions: 1066
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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