Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I12
         (871 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    24   2.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   6.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   6.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.4  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 680 KNLAILKAAVGKKCGVDFLLHLINT 606
           K++  L  A+G   GV  LLH++ T
Sbjct: 111 KHIVRLVTAIGDAYGVALLLHMLTT 135


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 150 RAFIQKRKKNGYGNIPIDIIYIDGRT 227
           +A IQ  + N   N+PID+   +G+T
Sbjct: 52  QAAIQSGEYNYKNNVPIDVDRWNGKT 77


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 630 INAALLANRCFQDR 671
           +NA +L N C+Q+R
Sbjct: 90  LNATVLPNSCYQER 103


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 630 INAALLANRCFQDR 671
           +NA +L N C+Q+R
Sbjct: 90  LNATVLPNSCYQER 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,816
Number of Sequences: 438
Number of extensions: 4515
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)