Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_I11
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 267 6e-72
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 267 6e-72
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 267 6e-72
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 267 6e-72
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 261 5e-70
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 260 1e-69
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 260 1e-69
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 259 1e-69
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 259 1e-69
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 258 5e-69
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 258 5e-69
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 258 5e-69
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 256 1e-68
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 256 1e-68
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 250 7e-67
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 238 3e-63
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 133 2e-31
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 80 2e-15
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 80 2e-15
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 77 1e-14
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 76 3e-14
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 45 7e-05
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 45 7e-05
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 33 0.32
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 33 0.32
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 33 0.32
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 33 0.32
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 33 0.32
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 33 0.32
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 33 0.32
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 33 0.32
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 32 0.43
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 32 0.43
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ... 31 0.75
AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical ... 31 0.75
U21324-10|AAM22045.1| 102|Caenorhabditis elegans Hypothetical p... 31 0.99
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 29 4.0
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 4.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 29 4.0
Z82084-3|CAB04977.1| 780|Caenorhabditis elegans Hypothetical pr... 29 5.3
U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine rec... 29 5.3
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 5.3
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 5.3
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 28 7.0
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 7.0
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 28 7.0
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 28 9.2
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 28 9.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 267 bits (655), Expect = 6e-72
Identities = 143/206 (69%), Positives = 152/206 (73%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWS-RTRQSSLPRRPTMNSFPSPRSQTH 574
SSITASL + DLTEFQTNLV P H+ T + + S T+
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLV--PYPRIHFPLATFSPVISAEKAYHEQLSVAEITN 293
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
P ++AVC RGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKV
Sbjct: 294 MCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKV 353
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM
Sbjct: 354 GINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 414 EEGEFSEAREDLAALEKDYEEVGVDS 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 267 bits (655), Expect = 6e-72
Identities = 143/206 (69%), Positives = 152/206 (73%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWS-RTRQSSLPRRPTMNSFPSPRSQTH 574
SSITASL + DLTEFQTNLV P H+ T + + S T+
Sbjct: 235 SSITASLRFDGALNVDLTEFQTNLV--PYPRIHFPLATFSPVISAEKAYHEQLSVAEITN 292
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
P ++AVC RGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKV
Sbjct: 293 MCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKV 352
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM
Sbjct: 353 GINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 412
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 413 EEGEFSEAREDLAALEKDYEEVGVDS 438
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 267 bits (655), Expect = 6e-72
Identities = 143/206 (69%), Positives = 152/206 (73%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWS-RTRQSSLPRRPTMNSFPSPRSQTH 574
SSITASL + DLTEFQTNLV P H+ T + + S T+
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLV--PYPRIHFPLATFSPVISAEKAYHEQLSVAEITN 293
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
P ++AVC RGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKV
Sbjct: 294 MCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKV 353
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM
Sbjct: 354 GINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 414 EEGEFSEAREDLAALEKDYEEVGVDS 439
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 267 bits (655), Expect = 6e-72
Identities = 143/206 (69%), Positives = 152/206 (73%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWS-RTRQSSLPRRPTMNSFPSPRSQTH 574
SSITASL + DLTEFQTNLV P H+ T + + S T+
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLV--PYPRIHFPLATFSPVISAEKAYHEQLSVAEITN 293
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
P ++AVC RGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKV
Sbjct: 294 MCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKV 353
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM
Sbjct: 354 GINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 414 EEGEFSEAREDLAALEKDYEEVGVDS 439
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 261 bits (639), Expect = 5e-70
Identities = 135/207 (65%), Positives = 151/207 (72%), Gaps = 4/207 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSL--PRRPTMNSFPSPRSQT 577
SS+TASL + DLTEFQTNLV P H+ T + + +
Sbjct: 241 SSVTASLRFDGALNVDLTEFQTNLV--PYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQ 298
Query: 576 HASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 400
P + P ++A C RGDVVPKDVNAAIA++KTKR+IQFVDWCPTGFK
Sbjct: 299 QCFEPGAQMVKCDP-RRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFK 357
Query: 399 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 220
VGINYQPPTVVPG DL+K+QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG
Sbjct: 358 VGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 417
Query: 219 MEEGEFSEAREDLAALEKDYEEVGMDS 139
MEEGEFSEAREDLAALEKDYEEVG+D+
Sbjct: 418 MEEGEFSEAREDLAALEKDYEEVGLDA 444
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 260 bits (636), Expect = 1e-69
Identities = 138/206 (66%), Positives = 149/206 (72%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSL-PRRPTMNSFPSPRSQTH 574
SSITASL + DL EFQTNLV P H+ + L + S T+
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLV--PYPRIHFPLAAYTPLISAEKAYHEALSVSDITN 291
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
+ P ++AVC RGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKV
Sbjct: 292 SCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKV 351
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGM
Sbjct: 352 GINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGM 411
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 412 EEGEFTEAREDLAALEKDYEEVGADS 437
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 260 bits (636), Expect = 1e-69
Identities = 138/206 (66%), Positives = 149/206 (72%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSL-PRRPTMNSFPSPRSQTH 574
SSITASL + DL EFQTNLV P H+ + L + S T+
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLV--PYPRIHFPLAAYTPLISAEKAYHEALSVSDITN 291
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
+ P ++AVC RGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKV
Sbjct: 292 SCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKV 351
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGM
Sbjct: 352 GINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGM 411
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 412 EEGEFTEAREDLAALEKDYEEVGADS 437
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 259 bits (635), Expect = 1e-69
Identities = 138/206 (66%), Positives = 149/206 (72%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSL-PRRPTMNSFPSPRSQTH 574
SSITASL + DL EFQTNLV P H+ + L + S T+
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLV--PYPRIHFPLAAYTPLISADKAYHEALSVNDITN 291
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
+ P ++AVC RGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKV
Sbjct: 292 SCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKV 351
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGM
Sbjct: 352 GINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGM 411
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 412 EEGEFTEAREDLAALEKDYEEVGADS 437
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 259 bits (635), Expect = 1e-69
Identities = 138/206 (66%), Positives = 149/206 (72%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSL-PRRPTMNSFPSPRSQTH 574
SSITASL + DL EFQTNLV P H+ + L + S T+
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLV--PYPRIHFPLAAYTPLISADKAYHEALSVNDITN 291
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
+ P ++AVC RGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKV
Sbjct: 292 SCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKV 351
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGM
Sbjct: 352 GINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGM 411
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 412 EEGEFTEAREDLAALEKDYEEVGADS 437
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 258 bits (631), Expect = 5e-69
Identities = 133/205 (64%), Positives = 149/205 (72%), Gaps = 3/205 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQ-TH 574
SSITASL + DLTEFQTNLV P H+ + L + + S TH
Sbjct: 242 SSITASLRFEGALNVDLTEFQTNLV--PYPRIHFPLVTYAPLVSAERASHEQNTVSDMTH 299
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
A P ++AVC RGDVVPKD+N+AIA +KTKRT+QFV+WCPTGFKV
Sbjct: 300 ACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKV 359
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDL K R+VCM+SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM
Sbjct: 360 GINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 419
Query: 216 EEGEFSEAREDLAALEKDYEEVGMD 142
EEGEFSEARED+AALEKDYEE+G D
Sbjct: 420 EEGEFSEAREDMAALEKDYEEIGED 444
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 258 bits (631), Expect = 5e-69
Identities = 135/206 (65%), Positives = 150/206 (72%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSR-TRQSSLPRRPTMNSFPSPRSQTH 574
SSITASL + DLTEFQTNLV P H+ T + + S T+
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLV--PYPRIHFPLVTYAPIISAEKAYHEQLSVSEITN 293
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
P ++A C RGDVVPK++N+AI+TIKTKR IQFVDWCPTGFKV
Sbjct: 294 VCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKV 353
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGD+AK+QRAVCMLSNTTAI EAWARLDHKFDLMYAKRAFVHWYVGEGM
Sbjct: 354 GINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGM 413
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEFSEARED+AALEKDYEEVG+DS
Sbjct: 414 EEGEFSEAREDMAALEKDYEEVGVDS 439
Score = 122 bits (295), Expect = 2e-28
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = -2
Query: 673 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 500
YPRIHFPLVTYAP+ISAEKAYHEQLSV+EITN CFEP +QMVKCDPR+GKYMACC+LY
Sbjct: 262 YPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCLLY 319
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 258 bits (631), Expect = 5e-69
Identities = 133/205 (64%), Positives = 149/205 (72%), Gaps = 3/205 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQ-TH 574
SSITASL + DLTEFQTNLV P H+ + L + + S TH
Sbjct: 214 SSITASLRFEGALNVDLTEFQTNLV--PYPRIHFPLVTYAPLVSAERASHEQNTVSDMTH 271
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
A P ++AVC RGDVVPKD+N+AIA +KTKRT+QFV+WCPTGFKV
Sbjct: 272 ACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKV 331
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDL K R+VCM+SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM
Sbjct: 332 GINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 391
Query: 216 EEGEFSEAREDLAALEKDYEEVGMD 142
EEGEFSEARED+AALEKDYEE+G D
Sbjct: 392 EEGEFSEAREDMAALEKDYEEIGED 416
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 256 bits (628), Expect = 1e-68
Identities = 135/206 (65%), Positives = 148/206 (71%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSL-PRRPTMNSFPSPRSQTH 574
SSITASL + DL EFQTNLV P H+ + L + S T+
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLV--PYPRIHFPLASYTPLISAEKAYHEALSVNDITN 291
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
+ P ++AVC RGDVVPKDVN AI IKTKR++QFVDWCPTGFKV
Sbjct: 292 SCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKV 351
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGM
Sbjct: 352 GINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGM 411
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 412 EEGEFTEAREDLAALEKDYEEVGADS 437
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 256 bits (628), Expect = 1e-68
Identities = 135/206 (65%), Positives = 148/206 (71%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSL-PRRPTMNSFPSPRSQTH 574
SSITASL + DL EFQTNLV P H+ + L + S T+
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLV--PYPRIHFPLASYTPLISAEKAYHEALSVNDITN 291
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
+ P ++AVC RGDVVPKDVN AI IKTKR++QFVDWCPTGFKV
Sbjct: 292 SCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKV 351
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGM
Sbjct: 352 GINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGM 411
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 412 EEGEFTEAREDLAALEKDYEEVGADS 437
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 250 bits (613), Expect = 7e-67
Identities = 132/205 (64%), Positives = 149/205 (72%), Gaps = 2/205 (0%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHA 571
SSITASL + DL EFQTNLV P H+ + L + F S T +
Sbjct: 233 SSITASLRFDGALNVDLNEFQTNLV--PYPRIHFPLVAYNPLISS-AHHEFLSVDEITKS 289
Query: 570 SSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 394
+ ++AVC RGDVVPKDV+AAI +IKT+R++QFVDWCPTGFKVG
Sbjct: 290 CFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVG 349
Query: 393 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 214
+NYQPPTV+PGGD+AKV RAVCMLSNTTAIAEAW RLD+KFDLMYAKRAFVHWYVGEGME
Sbjct: 350 LNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGME 409
Query: 213 EGEFSEAREDLAALEKDYEEVGMDS 139
EGEFSEAREDLAALEKDYEEVG DS
Sbjct: 410 EGEFSEAREDLAALEKDYEEVGADS 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 238 bits (583), Expect = 3e-63
Identities = 127/206 (61%), Positives = 142/206 (68%), Gaps = 3/206 (1%)
Frame = -3
Query: 747 SSITASLNXTRS-EWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFP-SPRSQTH 574
SSITASL + DL EFQTNLV P H+ + + + P S + TH
Sbjct: 239 SSITASLRFDGALNVDLNEFQTNLV--PYPRIHFPLATYAPVISADRAHHEPLSVQDITH 296
Query: 573 ASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 397
A ++AVC RGDVVPKDVNAAI+++K KR I FVDWCPTGFKV
Sbjct: 297 MCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKV 356
Query: 396 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 217
GINYQ P V GGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHW+VGEGM
Sbjct: 357 GINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGM 416
Query: 216 EEGEFSEAREDLAALEKDYEEVGMDS 139
EEGEF EAR+DLAALEKDY EV D+
Sbjct: 417 EEGEFMEARDDLAALEKDYAEVSRDT 442
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 133 bits (321), Expect = 2e-31
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = -3
Query: 333 VCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 154
VCMLS+TTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEE
Sbjct: 10 VCMLSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
Query: 153 VGMDS 139
VG DS
Sbjct: 70 VGADS 74
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/120 (32%), Positives = 65/120 (54%)
Frame = -3
Query: 513 AVCCTRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRA 334
A RG + K+V+ + I+ K + FVDW P K + PP ++ +
Sbjct: 313 AAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPR--------GLKMS 364
Query: 333 VCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 154
+ N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 365 ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 60.1 bits (139), Expect = 2e-09
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = -2
Query: 673 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 500
+PR+HF + +AP+ S + ++V E+T CF+ N M CDPRHG+Y+ ++
Sbjct: 260 FPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIF 317
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/120 (32%), Positives = 65/120 (54%)
Frame = -3
Query: 513 AVCCTRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRA 334
A RG + K+V+ + I+ K + FVDW P K + PP ++ +
Sbjct: 313 AAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPR--------GLKMS 364
Query: 333 VCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 154
+ N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 365 ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 60.1 bits (139), Expect = 2e-09
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = -2
Query: 673 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 500
+PR+HF + +AP+ S + ++V E+T CF+ N M CDPRHG+Y+ ++
Sbjct: 260 FPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIF 317
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/115 (33%), Positives = 64/115 (55%)
Frame = -3
Query: 498 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 319
RG + K+V+ + ++ K + FV+W P K + PP V+ A +
Sbjct: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GVKMAATFVG 369
Query: 318 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 154
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 56.0 bits (129), Expect = 3e-08
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = -2
Query: 673 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 500
+PR+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y+ ++
Sbjct: 260 FPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMF 317
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/115 (31%), Positives = 65/115 (56%)
Frame = -3
Query: 498 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 319
RG + ++V+ + +++ K + FV+W P K + PP ++ A +
Sbjct: 318 RGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFVG 369
Query: 318 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 154
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQ 424
Score = 55.2 bits (127), Expect = 5e-08
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = -2
Query: 673 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 500
+PR+HF + +AP+ + + L+VAE+T F+ N M CDPRHG+Y+ ++
Sbjct: 260 FPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMF 317
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 77.0 bits (181), Expect = 2e-14
Identities = 36/115 (31%), Positives = 64/115 (55%)
Frame = -3
Query: 498 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 319
RG + ++V+ + ++ K + FV+W P K + PP ++ A +
Sbjct: 318 RGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFVG 369
Query: 318 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 154
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQ 424
Score = 55.2 bits (127), Expect = 5e-08
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = -2
Query: 673 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 500
+PR+HF + +AP+ + + L+VAE+T F+ N M CDPRHG+Y+ ++
Sbjct: 260 FPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMF 317
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 76.2 bits (179), Expect = 3e-14
Identities = 35/115 (30%), Positives = 64/115 (55%)
Frame = -3
Query: 498 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 319
RG + ++V+ + ++ K + FV+W P K + PP ++ + +
Sbjct: 318 RGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFIG 369
Query: 318 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 154
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 55.2 bits (127), Expect = 5e-08
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = -2
Query: 673 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 500
+PR+HF + +AP+ + + L+VAE+T F+ N M CDPRHG+Y+ ++
Sbjct: 260 FPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMF 317
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = -3
Query: 345 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAA 175
++ + ++N+TAI E R+ +F ++ ++AF+HWY MEE EF++A DL +
Sbjct: 359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
Query: 174 LEKDYEEV 151
+ YE+V
Sbjct: 416 EFQQYEKV 423
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = -2
Query: 670 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 500
PR+HF + ++APV + S++++T + N M C+ GK+++ ++Y
Sbjct: 260 PRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIY 315
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = -3
Query: 345 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAA 175
++ + ++N+TAI E R+ +F ++ ++AF+HWY MEE EF++A DL +
Sbjct: 359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
Query: 174 LEKDYEEV 151
+ YE+V
Sbjct: 416 EFQQYEKV 423
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = -2
Query: 670 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLY 500
PR+HF + ++APV + S++++T + N M C+ GK+++ ++Y
Sbjct: 260 PRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIY 315
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 32.7 bits (71), Expect = 0.32
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = -3
Query: 747 SSITASLNXTRSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAS 568
S +TA+ R ++ + EF+ L+ P + S + +QSS PT SP +
Sbjct: 355 SEVTATTKFDRLKY-MAEFRKKLLALPDNFS--TTPKQSSPTSSPTTTRMRSPSTHKSTV 411
Query: 567 SPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIK 448
S T+ ++TP ST + D V K+ + TIK
Sbjct: 412 SQATKTASSTPQSPSTTTSF----DDFVEKEKKTVLETIK 447
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 32.7 bits (71), Expect = 0.32
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = -3
Query: 747 SSITASLNXTRSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAS 568
S +TA+ R ++ + EF+ L+ P + S + +QSS PT SP +
Sbjct: 569 SEVTATTKFDRLKY-MAEFRKKLLALPDNFS--TTPKQSSPTSSPTTTRMRSPSTHKSTV 625
Query: 567 SPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIK 448
S T+ ++TP ST + D V K+ + TIK
Sbjct: 626 SQATKTASSTPQSPSTTTSF----DDFVEKEKKTVLETIK 661
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 32.7 bits (71), Expect = 0.32
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = -3
Query: 747 SSITASLNXTRSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAS 568
S +TA+ R ++ + EF+ L+ P + S + +QSS PT SP +
Sbjct: 705 SEVTATTKFDRLKY-MAEFRKKLLALPDNFS--TTPKQSSPTSSPTTTRMRSPSTHKSTV 761
Query: 567 SPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIK 448
S T+ ++TP ST + D V K+ + TIK
Sbjct: 762 SQATKTASSTPQSPSTTTSF----DDFVEKEKKTVLETIK 797
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 32.7 bits (71), Expect = 0.32
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = -3
Query: 747 SSITASLNXTRSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAS 568
S +TA+ R ++ + EF+ L+ P + S + +QSS PT SP +
Sbjct: 754 SEVTATTKFDRLKY-MAEFRKKLLALPDNFS--TTPKQSSPTSSPTTTRMRSPSTHKSTV 810
Query: 567 SPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIK 448
S T+ ++TP ST + D V K+ + TIK
Sbjct: 811 SQATKTASSTPQSPSTTTSF----DDFVEKEKKTVLETIK 846
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 32.7 bits (71), Expect = 0.32
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = -3
Query: 747 SSITASLNXTRSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAS 568
S +TA+ R ++ + EF+ L+ P + S + +QSS PT SP +
Sbjct: 754 SEVTATTKFDRLKY-MAEFRKKLLALPDNFS--TTPKQSSPTSSPTTTRMRSPSTHKSTV 810
Query: 567 SPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIK 448
S T+ ++TP ST + D V K+ + TIK
Sbjct: 811 SQATKTASSTPQSPSTTTSF----DDFVEKEKKTVLETIK 846
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 32.7 bits (71), Expect = 0.32
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = -3
Query: 747 SSITASLNXTRSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAS 568
S +TA+ R ++ + EF+ L+ P + S + +QSS PT SP +
Sbjct: 754 SEVTATTKFDRLKY-MAEFRKKLLALPDNFS--TTPKQSSPTSSPTTTRMRSPSTHKSTV 810
Query: 567 SPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIK 448
S T+ ++TP ST + D V K+ + TIK
Sbjct: 811 SQATKTASSTPQSPSTTTSF----DDFVEKEKKTVLETIK 846
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 32.7 bits (71), Expect = 0.32
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = -3
Query: 747 SSITASLNXTRSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAS 568
S +TA+ R ++ + EF+ L+ P + S + +QSS PT SP +
Sbjct: 746 SEVTATTKFDRLKY-MAEFRKKLLALPDNFS--TTPKQSSPTSSPTTTRMRSPSTHKSTV 802
Query: 567 SPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIK 448
S T+ ++TP ST + D V K+ + TIK
Sbjct: 803 SQATKTASSTPQSPSTTTSF----DDFVEKEKKTVLETIK 838
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 32.7 bits (71), Expect = 0.32
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = -3
Query: 747 SSITASLNXTRSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAS 568
S +TA+ R ++ + EF+ L+ P + S + +QSS PT SP +
Sbjct: 758 SEVTATTKFDRLKY-MAEFRKKLLALPDNFS--TTPKQSSPTSSPTTTRMRSPSTHKSTV 814
Query: 567 SPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIK 448
S T+ ++TP ST + D V K+ + TIK
Sbjct: 815 SQATKTASSTPQSPSTTTSF----DDFVEKEKKTVLETIK 850
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -2
Query: 682 LGAYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 533
L +P +HF +PV+ + + + SVA++T +P + MV R
Sbjct: 260 LAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASR 309
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -3
Query: 327 MLSNTTAIAEAWARLDHKFDLMYAKRAFV 241
+L+N+T++A + L K+D + +KRAF+
Sbjct: 375 LLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -2
Query: 682 LGAYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 533
L +P +HF +PV+ + + + SVA++T +P + MV R
Sbjct: 260 LAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASR 309
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -3
Query: 327 MLSNTTAIAEAWARLDHKFDLMYAKRAFV 241
+L+N+T++A + L K+D + +KRAF+
Sbjct: 375 LLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
protein Y73F8A.5 protein.
Length = 1019
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 370 HGGWLVVDTDLETGWTPVDEL-DSTLGFDGSDGRVHILGYDVTTGTAYSKPCTCHDGGRI 546
+G W +L++G + + + +G+ S+ +HI DV G A+++ CT G
Sbjct: 218 NGDWRKRRIELKSGANVISWIIQNNMGYQASNQPIHIDRIDVL-GLAFTRQCTACPPGTS 276
Query: 547 SPSG 558
SP G
Sbjct: 277 SPGG 280
>AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical
protein Y55B1BR.2 protein.
Length = 740
Score = 31.5 bits (68), Expect = 0.75
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 470 TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRF 342
T PS+PS+P ++ + V+ +V+TTS P A PRF
Sbjct: 345 TTPSVPSRPPSALSTHSHVETEVAAVATTSAPAEASAAVKPRF 387
>U21324-10|AAM22045.1| 102|Caenorhabditis elegans Hypothetical
protein C35D10.17 protein.
Length = 102
Score = 31.1 bits (67), Expect = 0.99
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 254 SVLSCTGTSVRVWRRENSPKPVRTWLPSRRITKKSAWTPLKARVRE 117
+V CT R+WRR+N+P R + R + +K WTP +++E
Sbjct: 43 AVWQCTKKE-RIWRRDNNPAYKRRIVELRSLPEK-YWTPALHKLKE 86
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 567 SPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKRTI-------QFVDWCPT 409
S T W +A+P+ + +L R V+ D A K T +DWCP
Sbjct: 289 SQVTEWFDASPL--NNFLIHIANRFGVMHSDSTACTTCPKVYDTACQGFGIPSLIDWCPQ 346
Query: 408 GFKVGINY 385
+VG+NY
Sbjct: 347 AAEVGVNY 354
>Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical
protein K09C8.4 protein.
Length = 633
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -3
Query: 762 HRTDXSSITASLNXTRSEW---DLTEFQTNLVXTPVSTSHWSR 643
HR+D + S N + EW +LTEF+ + P SH+S+
Sbjct: 70 HRSDIHELMTSWNISNCEWFFHNLTEFEKRVAWIP--NSHYSK 110
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -2
Query: 475 CERGHRYHQNQAYYPIRR--LVSNRFQGRYQLPATHRGARRRLGQGST 338
CE + N +YY + R +S +F+ R QLPA A +++ GST
Sbjct: 666 CEYFIPHWMNYSYYQMARRSAISVQFRPRIQLPAAVLSAPKKMIMGST 713
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.1 bits (62), Expect = 4.0
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Frame = -3
Query: 687 TNLVXTPVSTSHWSRTRQSSLP-RRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLA 511
T PV T+ S T Q++ P +PT+ P S T + P T + PV ++ L
Sbjct: 519 TGTTTVPVPTTTGSPTTQTTAPVTKPTV-----PSSTTQTAPPVTTPTSQPPVTTTSLLT 573
Query: 510 VCCTRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
T V V + AT+ T T K + PT+ P
Sbjct: 574 TLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAP 622
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 4.0
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Frame = -3
Query: 687 TNLVXTPVSTSHWSRTRQSSLP-RRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLA 511
T PV T+ S T Q++ P +PT+ P S T + P T + PV ++ L
Sbjct: 575 TGTTTVPVPTTTGSPTTQTTAPVTKPTV-----PSSTTQTAPPVTTPTSQPPVTTTSLLT 629
Query: 510 VCCTRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
T V V + AT+ T T K + PT+ P
Sbjct: 630 TLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAP 678
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -2
Query: 475 CERGHRYHQNQAYYPIRR--LVSNRFQGRYQLPATHRGARRRLGQGST 338
CE + N +YY + R +S +F+ R QLPA A +++ GST
Sbjct: 666 CEYFIPHWMNYSYYQMARRSAISVQFRPRIQLPAAVLSAPKKMIMGST 713
>Z82084-3|CAB04977.1| 780|Caenorhabditis elegans Hypothetical
protein ZK1053.3 protein.
Length = 780
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -3
Query: 603 SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKRTIQFV 424
S P+ + +S R N P++ ++L C ++ P+D+ ++ K+K+ Q
Sbjct: 37 SAPAAPNNAAGTSDQDRPPNLAPILMLSYLNHCMSKKSFTPEDIQKSVWEQKSKKLSQ-E 95
Query: 423 DW 418
DW
Sbjct: 96 DW 97
>U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein56 protein.
Length = 298
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 91 YFIGLVLFGSLTLAFSGVHADFFVILLEGSQVLTGF 198
YF +VLF T+ H FF++ L +LT F
Sbjct: 60 YFCPMVLFDQSTMKQYSHHCGFFILFLSEFSILTHF 95
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 672 TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 553
T +ST+ + R ++ RRP N P+PR +T+ P R
Sbjct: 128 TFISTTTSNSRRLQTVTRRPFANRRPAPRQRTNIIRPTIR 167
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 28.7 bits (61), Expect = 5.3
Identities = 28/100 (28%), Positives = 45/100 (45%)
Frame = -3
Query: 747 SSITASLNXTRSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAS 568
S +TA+ R ++ + EF+ L+ P + S + +QSS PT SP +
Sbjct: 758 SEVTATTKFDRLKY-MAEFR-KLLALPDNFS--TTPKQSSPTSSPTTTRMRSPSTHKSTV 813
Query: 567 SPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIK 448
S T+ ++TP ST + D V K+ + TIK
Sbjct: 814 SQATKTASSTPQSPSTTTSF----DDFVEKEKKTVLETIK 849
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 28.3 bits (60), Expect = 7.0
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
Frame = -3
Query: 735 ASLNXTRSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASS--P 562
A N T+ T + T +++S + + S + T S S ++ S+ P
Sbjct: 394 ARTNTTQPPTTTPLSSTTALPTTLTSSSSTESTDGSSTQTSTHPSQLSVKATQLVSTAEP 453
Query: 561 PTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 382
T +T +AST L V +A T+ T+ F+D P+ N Q
Sbjct: 454 STDTFQSTKPIASTSLPTDIPSSLVSENSTTSAATTLSENSTVMFIDQ-PSSIS-SENIQ 511
Query: 381 PPTVVP 364
PP V P
Sbjct: 512 PPEVSP 517
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 105 STLRLPHPRLQRSPCRLLRNP--SRGQPGPHGLR-RILPPPYPHRRTS 239
S R P P+ + P R R+P S+ P P + R PP P RR S
Sbjct: 395 SKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRS 442
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +1
Query: 67 TVRVRHKRYFIGLVLFGSLTLAFSGVHADF-FVILLEGSQVLTGFGEFSLLHTLTDV--P 237
TV V + IG++L G L L + VH DF + L ++ LTG ++ D+
Sbjct: 47 TVAVIAQNLPIGVILAGVLILYITVVHGDFIYRSYLTLNRDLTGLA--LIIEVKIDLWWR 104
Query: 238 VHESTLGVHEVEL-VVKASPS 297
+H++ G+HE+ L +VK +P+
Sbjct: 105 LHQNK-GIHELFLDIVKKNPN 124
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 7.0
Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
Frame = -1
Query: 428 SSTGVQPV-SRSVSTTSHPPWCPEATWPRFNVXXXXXXXXXXXPKLGLALT------TSS 270
S+T QPV + S ST +AT P +V G+ T TSS
Sbjct: 304 SNTTTQPVVTTSTSTQGISTTTAQAT-PSSSVIPTTTQTTQRPTSTGIPSTVSTSQGTSS 362
Query: 269 TSCTPSVLSCTGTSVRVWRRENSPKPVRTWLPSRRITKKSAWTPLKARVREPKST 105
TS PS + ++ + +P P T L S I + P ++ P ST
Sbjct: 363 TSPIPSTTQTSSSAPSTYTSNFTPSPTTTLLTS-TIAPSTQGVPTSSKSSSPNST 416
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -3
Query: 717 RSEWDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW 550
RS W+ T + +P+ + R+R S PRR + P R + + PTRW
Sbjct: 554 RSRWENTSPIRSPRRSPLRRDNRDRSRSRSPPRRRRRSRSPRRREE---HTDPTRW 606
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 430 LDSTLGFDGSDGRVHILGYD-VTTGTAYSKPCTCHDGG 540
L + GFDG + + YD VT + TCH+GG
Sbjct: 541 LFAVAGFDGENNLCSMEQYDDVTDSWTIATALTCHEGG 578
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 430 LDSTLGFDGSDGRVHILGYD-VTTGTAYSKPCTCHDGG 540
L + GFDG + + YD VT + TCH+GG
Sbjct: 539 LFAVAGFDGENNLCSMEQYDDVTDSWTIATALTCHEGG 576
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,248,987
Number of Sequences: 27780
Number of extensions: 422127
Number of successful extensions: 1631
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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