Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I09
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084268-1|AAM81103.2|  425|Caenorhabditis elegans Hypothetical ...   163   2e-40
U23172-3|AAC46526.1|  547|Caenorhabditis elegans Hypothetical pr...    36   0.033
AF026207-1|AAB71266.1|  522|Caenorhabditis elegans Hypothetical ...    31   0.94 
Z75542-6|CAA99864.3|  552|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z75538-3|CAA99842.3|  552|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z70270-2|CAA94228.1|  445|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>AC084268-1|AAM81103.2|  425|Caenorhabditis elegans Hypothetical
           protein Y92H12BL.1 protein.
          Length = 425

 Score =  163 bits (395), Expect = 2e-40
 Identities = 75/139 (53%), Positives = 103/139 (74%), Gaps = 1/139 (0%)
 Frame = -1

Query: 612 PGITIATDIICGFPTETEADFEETMQLCRKYKFPSLFINQFFPRPGTPAAKMTRVPGQEV 433
           P I IATD+I  FPTET  DFEE+M+L RKYKFPSLFINQ++PR GTPAA++ ++   E 
Sbjct: 215 PNIYIATDMILAFPTETLEDFEESMELVRKYKFPSLFINQYYPRSGTPAARLKKIDTVEA 274

Query: 432 KKRTKLLSDFFRSYEPY-GHKVGETQEVLVTDVSHDKNYFVGHNEFYEQVLIPKEEKYMG 256
           +KRT  +S+ FRSY  Y   ++GE   VLVT+V+ DK + VGHN+ YEQ+L+P E   MG
Sbjct: 275 RKRTAAMSELFRSYTRYTDERIGELHRVLVTEVAADKLHGVGHNKSYEQILVPLEYCKMG 334

Query: 255 KLVTVKITSASKFSMMGQP 199
           + + V++T+ +KFSM+ +P
Sbjct: 335 EWIEVRVTAVTKFSMISKP 353



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = -3

Query: 742 PRVYKFLHVPVQSASDXVLXRHEEGNTTRADFEHVVDYL 626
           P+VY FLH+PVQSASD VL    +   +R  FE + DY+
Sbjct: 173 PKVYAFLHIPVQSASDAVL-NDMKREYSRRHFEQIADYM 210


>U23172-3|AAC46526.1|  547|Caenorhabditis elegans Hypothetical
           protein F25B5.5 protein.
          Length = 547

 Score = 35.9 bits (79), Expect = 0.033
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = -1

Query: 612 PGITIATDIICGFPTETEADFEETMQLCRKYKFPSLFINQFFPRPGTPA-AKMTRVPGQE 436
           P +++ +D I GF  ETE   + T+ L R  ++   F+  +  R  T A  ++T    ++
Sbjct: 397 PSVSLTSDFIAGFCGETEQAHQNTLSLIRAVRYSFCFVFPYSMRGKTRAHHRLTDDVPED 456

Query: 435 VKKRTKL-LSDFFR 397
           VK R  L L+  FR
Sbjct: 457 VKARRHLDLTTVFR 470



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -3

Query: 742 PRVYKFLHVPVQSASDXVLXRHEEGNTTRADFEHVVDYLR 623
           P + K LH+P QS  D  L R E G  TR  +  +VD +R
Sbjct: 355 PNLCKQLHLPAQSGDDETLERMERG-YTRDLYLRLVDDIR 393


>AF026207-1|AAB71266.1|  522|Caenorhabditis elegans Hypothetical
           protein H42K12.3 protein.
          Length = 522

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -1

Query: 507 LFINQFFPRPGTPAAKMTRVPGQEVKKRTKLLSDFFRSYEPYGHKVGETQE 355
           + I++  P+P +P  K+    G+EVK   K    F    E    + GE +E
Sbjct: 228 VLISETTPKPDSPVEKVVEEVGEEVKPEMKPEEQFDEKQEETNAQTGEDEE 278


>Z75542-6|CAA99864.3|  552|Caenorhabditis elegans Hypothetical
           protein F55D12.5 protein.
          Length = 552

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 480 PGTPAAKMTRVPGQEVKKRTKLLSDFFRSYEPY 382
           P T   K  + P QEVKK  K    ++++++PY
Sbjct: 345 PTTTTMKTIKYPIQEVKKEKKNYESYYKNWKPY 377


>Z75538-3|CAA99842.3|  552|Caenorhabditis elegans Hypothetical
           protein F55D12.5 protein.
          Length = 552

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 480 PGTPAAKMTRVPGQEVKKRTKLLSDFFRSYEPY 382
           P T   K  + P QEVKK  K    ++++++PY
Sbjct: 345 PTTTTMKTIKYPIQEVKKEKKNYESYYKNWKPY 377


>Z70270-2|CAA94228.1|  445|Caenorhabditis elegans Hypothetical
           protein C53D6.3 protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 657 RVVFPSSCRXSTXSLADCTGTW 722
           R +FP  C  S+ SL+ CT  W
Sbjct: 379 RFMFPPGCSESSKSLSSCTSGW 400


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,620,059
Number of Sequences: 27780
Number of extensions: 304806
Number of successful extensions: 766
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)