Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I03
         (787 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031030-1|AAH31030.1|  235|Homo sapiens Unknown (protein for IM...    67   8e-11
Z30093-1|CAA82909.1|  303|Homo sapiens basic transcription facto...    66   1e-10
BC065250-1|AAH65250.1|  308|Homo sapiens general transcription f...    66   1e-10
BC047868-1|AAH47868.2|  303|Homo sapiens GTF2H3 protein protein.       66   1e-10
BC039726-1|AAH39726.1|  303|Homo sapiens GTF2H3 protein protein.       66   1e-10
AF548661-1|AAN40702.1|  308|Homo sapiens general transcription f...    66   1e-10

>BC031030-1|AAH31030.1|  235|Homo sapiens Unknown (protein for
           IMAGE:4724313) protein.
          Length = 235

 Score = 66.9 bits (156), Expect = 8e-11
 Identities = 30/61 (49%), Positives = 36/61 (59%)
 Frame = -2

Query: 759 WGFLPEANERSKLYCXGGAAWTTALPASAXRELLTIGYVCSVXLSVFCKFSPICTTCHTV 580
           W FLP+ ++RS+L                 R L+ IGYVCSV LS+FC FSPICTTC T 
Sbjct: 156 WVFLPDQDQRSRLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETA 215

Query: 579 F 577
           F
Sbjct: 216 F 216


>Z30093-1|CAA82909.1|  303|Homo sapiens basic transcription factor
           2, 35 kD subunit protein.
          Length = 303

 Score = 66.5 bits (155), Expect = 1e-10
 Identities = 30/61 (49%), Positives = 36/61 (59%)
 Frame = -2

Query: 759 WGFLPEANERSKLYCXGGAAWTTALPASAXRELLTIGYVCSVXLSVFCKFSPICTTCHTV 580
           W FLP+ ++RS+L                 R L+ IGYVCSV LS+FC FSPICTTC T 
Sbjct: 229 WVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETA 288

Query: 579 F 577
           F
Sbjct: 289 F 289


>BC065250-1|AAH65250.1|  308|Homo sapiens general transcription
           factor IIH, polypeptide 3, 34kDa protein.
          Length = 308

 Score = 66.5 bits (155), Expect = 1e-10
 Identities = 30/61 (49%), Positives = 36/61 (59%)
 Frame = -2

Query: 759 WGFLPEANERSKLYCXGGAAWTTALPASAXRELLTIGYVCSVXLSVFCKFSPICTTCHTV 580
           W FLP+ ++RS+L                 R L+ IGYVCSV LS+FC FSPICTTC T 
Sbjct: 229 WVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETA 288

Query: 579 F 577
           F
Sbjct: 289 F 289


>BC047868-1|AAH47868.2|  303|Homo sapiens GTF2H3 protein protein.
          Length = 303

 Score = 66.5 bits (155), Expect = 1e-10
 Identities = 30/61 (49%), Positives = 36/61 (59%)
 Frame = -2

Query: 759 WGFLPEANERSKLYCXGGAAWTTALPASAXRELLTIGYVCSVXLSVFCKFSPICTTCHTV 580
           W FLP+ ++RS+L                 R L+ IGYVCSV LS+FC FSPICTTC T 
Sbjct: 224 WVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETA 283

Query: 579 F 577
           F
Sbjct: 284 F 284


>BC039726-1|AAH39726.1|  303|Homo sapiens GTF2H3 protein protein.
          Length = 303

 Score = 66.5 bits (155), Expect = 1e-10
 Identities = 30/61 (49%), Positives = 36/61 (59%)
 Frame = -2

Query: 759 WGFLPEANERSKLYCXGGAAWTTALPASAXRELLTIGYVCSVXLSVFCKFSPICTTCHTV 580
           W FLP+ ++RS+L                 R L+ IGYVCSV LS+FC FSPICTTC T 
Sbjct: 224 WVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETA 283

Query: 579 F 577
           F
Sbjct: 284 F 284


>AF548661-1|AAN40702.1|  308|Homo sapiens general transcription
           factor IIH, polypeptide 3, 34kDa protein.
          Length = 308

 Score = 66.5 bits (155), Expect = 1e-10
 Identities = 30/61 (49%), Positives = 36/61 (59%)
 Frame = -2

Query: 759 WGFLPEANERSKLYCXGGAAWTTALPASAXRELLTIGYVCSVXLSVFCKFSPICTTCHTV 580
           W FLP+ ++RS+L                 R L+ IGYVCSV LS+FC FSPICTTC T 
Sbjct: 229 WVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETA 288

Query: 579 F 577
           F
Sbjct: 289 F 289


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,553,320
Number of Sequences: 237096
Number of extensions: 1859644
Number of successful extensions: 2972
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2960
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)