Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_H24
(915 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 315 4e-86
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 312 3e-85
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 308 3e-84
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 299 2e-81
03_01_0034 + 318432-318825,318902-319851 108 7e-24
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 106 2e-23
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 106 2e-23
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 106 3e-23
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 106 3e-23
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 106 3e-23
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 105 4e-23
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 103 3e-22
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 39 0.006
05_07_0242 + 28615573-28616304 33 0.42
01_06_1014 - 33810112-33811995 31 0.97
11_06_0030 - 19415263-19415388,19415649-19415728,19416196-194162... 31 1.3
07_03_1418 - 26421341-26421527,26421618-26423157,26424293-26424524 31 1.3
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 30 2.9
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 5.2
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 6.8
07_03_0033 + 12656255-12656297,12657402-12657408,12657484-126580... 28 9.0
04_03_0664 + 18501248-18502802,18503370-18505054 28 9.0
02_02_0574 - 11701359-11701460,11701469-11701570,11701725-117019... 28 9.0
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 315 bits (773), Expect = 4e-86
Identities = 138/162 (85%), Positives = 152/162 (93%)
Frame = -2
Query: 617 SCREAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIK 438
S +AYHEQLSV EITNA FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIK
Sbjct: 277 SAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIK 336
Query: 437 TKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFD 258
TKRT+QFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFD
Sbjct: 337 TKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFD 396
Query: 257 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 132
LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 397 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 312 bits (766), Expect = 3e-85
Identities = 136/163 (83%), Positives = 153/163 (93%)
Frame = -2
Query: 617 SCREAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIK 438
S +AYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIK
Sbjct: 277 SAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIK 336
Query: 437 TKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFD 258
TKRTIQFVDWCPTGFK GINYQPP+VVP GDLAKVQRAVCM+SN+T++ E ++R+DHKFD
Sbjct: 337 TKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFD 396
Query: 257 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 129
LMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +S
Sbjct: 397 LMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES 439
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 308 bits (757), Expect = 3e-84
Identities = 135/162 (83%), Positives = 152/162 (93%)
Frame = -2
Query: 617 SCREAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIK 438
S +AYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIK
Sbjct: 277 SAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIK 336
Query: 437 TKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFD 258
TKRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN+T++ E ++R+D KFD
Sbjct: 337 TKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFD 396
Query: 257 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 132
LMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 397 LMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGSE 438
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 299 bits (734), Expect = 2e-81
Identities = 131/162 (80%), Positives = 148/162 (91%)
Frame = -2
Query: 617 SCREAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIK 438
S +A+HEQ SV EITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ +IK
Sbjct: 358 SVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIK 417
Query: 437 TKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFD 258
T+RT+QFVDWCPTGFK GINYQPPT VPGGDLAKV+RAVCM+SN TA+AE ++R+D KFD
Sbjct: 418 TRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFD 477
Query: 257 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 132
LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 478 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 519
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 108 bits (259), Expect = 7e-24
Identities = 49/152 (32%), Positives = 86/152 (56%)
Frame = -2
Query: 599 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 420
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 419 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 240
FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 239 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 144
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 106 bits (255), Expect = 2e-23
Identities = 48/152 (31%), Positives = 85/152 (55%)
Frame = -2
Query: 599 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 420
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 419 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 240
FV+W P K + PP ++ A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSSVCDIPPR--------GLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 239 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 144
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 106 bits (255), Expect = 2e-23
Identities = 48/152 (31%), Positives = 85/152 (55%)
Frame = -2
Query: 599 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 420
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 419 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 240
FV+W P K + PP ++ A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSSVCDIPPN--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 239 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 144
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 106 bits (254), Expect = 3e-23
Identities = 48/152 (31%), Positives = 85/152 (55%)
Frame = -2
Query: 599 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 420
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 419 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 240
FV+W P K + PP ++ A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSSVCDIPPI--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 239 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 144
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 106 bits (254), Expect = 3e-23
Identities = 48/152 (31%), Positives = 84/152 (55%)
Frame = -2
Query: 599 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 420
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 302 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 361
Query: 419 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 240
FV+W P K + PP + A + N+T+I E + R+ +F M+ ++
Sbjct: 362 FVEWIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 413
Query: 239 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 144
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 414 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 106 bits (254), Expect = 3e-23
Identities = 48/152 (31%), Positives = 84/152 (55%)
Frame = -2
Query: 599 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 420
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 340
Query: 419 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 240
FV+W P K + PP + A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 239 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 144
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 105 bits (253), Expect = 4e-23
Identities = 48/152 (31%), Positives = 84/152 (55%)
Frame = -2
Query: 599 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 420
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 461 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 520
Query: 419 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 240
FV+W P K + PP + A + N+T+I E + R+ +F M+ ++
Sbjct: 521 FVEWIPNNVKSSVCDIPPR--------GLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRK 572
Query: 239 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 144
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 573 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 604
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 103 bits (246), Expect = 3e-22
Identities = 47/152 (30%), Positives = 83/152 (54%)
Frame = -2
Query: 599 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 420
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 297 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSY 356
Query: 419 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 240
FV+W P K + PP + A + N+T+I E + R+ +F M+ ++
Sbjct: 357 FVEWIPNNVKSSVCDIPP--------VGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRK 408
Query: 239 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 144
AF+HWY EGM+E EF+EA ++ L +Y++
Sbjct: 409 AFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQ 440
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 38.7 bits (86), Expect = 0.006
Identities = 29/127 (22%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Frame = -2
Query: 515 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 336
KY++ + +G+V P V+ ++ I+ ++ + F++W P A
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGP--------------------AS 357
Query: 335 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY----VGEGMEEGEFSEAREDLA 168
+Q + ML+N T+I +++ +++ + K+AF+ Y + E + EF E+RE +
Sbjct: 358 IQVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIE 417
Query: 167 ALEKDYE 147
+L +Y+
Sbjct: 418 SLVDEYK 424
>05_07_0242 + 28615573-28616304
Length = 243
Score = 32.7 bits (71), Expect = 0.42
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +2
Query: 101 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTCGQGE 280
L +P P R P LL P + QP PH L PP+P+ T + T + +G
Sbjct: 91 LLIPSPPTPRVP--LLMPPPQPQPHPHPQHPYLHPPFPYHHTPSGSGGTTTESSSEERGP 148
Query: 281 P 283
P
Sbjct: 149 P 149
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.97
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 248 AKRAFVHWYVGEGMEEGEFSEAREDL 171
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>11_06_0030 -
19415263-19415388,19415649-19415728,19416196-19416232,
19416338-19416460,19417195-19417242,19417335-19417378,
19417461-19417506,19417581-19417623,19418329-19418422,
19418503-19418604,19419936-19420014,19420698-19420964
Length = 362
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 444 GSDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVG 605
G + ILG+ +TT ++T + + GV + G+ C G LF+ G
Sbjct: 166 GHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 219
>07_03_1418 - 26421341-26421527,26421618-26423157,26424293-26424524
Length = 652
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 420 LDSTLGFDGSDGRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 560
+ S L G G V I Y D+ + + +H L+ TG++ +H+ G++
Sbjct: 33 MSSALAAAGYTGPVSISAYGDIGRIGNAVTHALSSTGISLNHVPAGIK 80
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 110 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARK 238
P PR + P R + +P P RRT P P H T +R+
Sbjct: 265 PSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRR 307
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 170 PGPHGLRRTLPPPYPHRRTSARKH 241
P H LR + PPP+PH R H
Sbjct: 19 PSAHLLRLSRPPPFPHLRRRCAPH 42
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 104 RLPHPRLQRSPCRLLRNPS-RGQPGPHGLRRTLPPPYPHRRTSARKHAWR 250
R P+P L PC L PS G G G PPP PH R + + A+R
Sbjct: 15 RSPNPNLNL-PCPLPPIPSCGGGGGGAGPTPPPPPPPPHHRRARSEVAFR 63
>07_03_0033 +
12656255-12656297,12657402-12657408,12657484-12658016,
12658106-12658224,12658329-12658688,12659602-12659784
Length = 414
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -3
Query: 244 SVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKSTKPMKYLL 74
S+ GT V V R+ S + PS ++ + + +PL A ++EPK T+ + + L
Sbjct: 357 SMAGSAGTGVNVGRQRSP----QVTAPSPQVHEPPSISPLCAAIQEPKYTRDLLHAL 409
>04_03_0664 + 18501248-18502802,18503370-18505054
Length = 1079
Score = 28.3 bits (60), Expect = 9.0
Identities = 8/34 (23%), Positives = 22/34 (64%)
Frame = +3
Query: 465 ILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEAC 566
+L +++ ++H + ++ + +++HHL L+AC
Sbjct: 416 MLRENISNIEHNSEGIMKILRLSYHHLAPHLQAC 449
>02_02_0574 -
11701359-11701460,11701469-11701570,11701725-11701922,
11702090-11704052,11705312-11706126
Length = 1059
Score = 28.3 bits (60), Expect = 9.0
Identities = 9/35 (25%), Positives = 24/35 (68%)
Frame = -2
Query: 539 VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 435
++C PR+ +Y++C L ++P+ +N+++ ++ T
Sbjct: 737 IRCSPRYLRYLSCGQL---SILPRWINSSLLSLST 768
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,092,148
Number of Sequences: 37544
Number of extensions: 500592
Number of successful extensions: 1957
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1946
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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