Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_H22
         (920 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    60   3e-09
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    52   6e-07
U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical pr...    38   0.008
Z83125-11|CAB05617.2|  320|Caenorhabditis elegans Hypothetical p...    30   2.7  
AJ972875-1|CAI99633.1|  304|Caenorhabditis elegans beta-1,3-gluc...    30   2.7  
AL032637-6|CAA21620.2|  422|Caenorhabditis elegans Hypothetical ...    29   3.5  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 25/54 (46%), Positives = 34/54 (62%)
 Frame = -3

Query: 312 DTCRGDGGSPLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWID 151
           D+C+GD G PL+C  D     +   G+V+WGIGC   G PGVY +V +  TWI+
Sbjct: 235 DSCQGDSGGPLMCARD---GHWELTGVVSWGIGCARPGMPGVYGNVHSASTWIN 285



 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -2

Query: 604 YDIALLFLETPLDSAPNVGVACLP--PARERAPAGVRCFATGWGKDKFGKEGRYQVIMKK 431
           YD A++ +  P++++      CLP  PA E       C  TGWG    G        +++
Sbjct: 144 YDFAIMRIHPPVNTSTTARPICLPSLPAVENR----LCVVTGWGSTIEG-SSLSAPTLRE 198

Query: 430 VDVPVVDRNTCQS 392
           + VP++    C S
Sbjct: 199 IHVPLLSTLFCSS 211


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = -3

Query: 312 DTCRGDGGSPLVCPIDYEKNRYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAGK 133
           D+C+GD G P  C    E   +V  G+++WG GC +   PG+Y  V+   +WI   + G+
Sbjct: 206 DSCQGDSGGPFACR--REDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAIINGQ 263


>U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical
           protein F48E3.4 protein.
          Length = 279

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 306 CRGDGGSPLVCPIDYEKNRYVQYGIVAWGIG---CGEDGTPGVYVDVSNLRT 160
           C  D G+PL C +D E N+YVQ GIV+   G     ED +  V V+ S ++T
Sbjct: 197 CWDDIGAPLECVLDVENNKYVQVGIVSGLYGREMDKEDNSTMVVVNCSEVQT 248


>Z83125-11|CAB05617.2|  320|Caenorhabditis elegans Hypothetical
           protein T15D6.7 protein.
          Length = 320

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -2

Query: 766 GVXSSXWFRRHSAXQXLRSEPANGHAEHEGDISVSRQDSQGNRD 635
           G  +  W++R  A + +R+ P+    EHEG+  +   D   + D
Sbjct: 125 GYPARGWYQRDMALKLIRTNPSQILGEHEGEAVIYFADDDNSYD 168


>AJ972875-1|CAI99633.1|  304|Caenorhabditis elegans
           beta-1,3-glucuronosyltransferase protein.
          Length = 304

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -2

Query: 766 GVXSSXWFRRHSAXQXLRSEPANGHAEHEGDISVSRQDSQGNRD 635
           G  +  W++R  A + +R+ P+    EHEG+  +   D   + D
Sbjct: 125 GYPARGWYQRDMALKLIRTNPSQILGEHEGEAVIYFADDDNSYD 168


>AL032637-6|CAA21620.2|  422|Caenorhabditis elegans Hypothetical
           protein Y43F8C.6 protein.
          Length = 422

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 459 SFPNLSFPQPVAKHLTPAGARSLAGGRHATPTFGAESNG 575
           S P+ S P P + + T AG  +L    HA P  GA   G
Sbjct: 268 SGPSSSAPGPSSSYSTGAGGGALLSTGHAVPIMGAGGTG 306


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,333,919
Number of Sequences: 27780
Number of extensions: 254483
Number of successful extensions: 663
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)