Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_H18
         (823 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0225 + 26951993-26952165,26953169-26953567,26953644-269537...    30   1.9  
04_03_0316 + 14261942-14262506,14262710-14263134                       28   7.8  

>02_05_0225 + 26951993-26952165,26953169-26953567,26953644-26953797,
            26954069-26954240,26954494-26954567,26954667-26954763,
            26954888-26955000,26955168-26955283,26955960-26956017,
            26956512-26956664,26957377-26957460,26957579-26957734,
            26958401-26958469,26959212-26959300,26959398-26959560,
            26959740-26959874,26959950-26960055,26960143-26960237,
            26960508-26960753,26961567-26961635,26961772-26961837,
            26961838-26961983,26962348-26962449,26962752-26962899,
            26964183-26964239,26964315-26964445,26964535-26964623,
            26964694-26965007,26965084-26965176,26966504-26966578,
            26966834-26966895,26967254-26967356,26967518-26967676,
            26967790-26967930,26967981-26968084,26968146-26968260,
            26969017-26969169,26969256-26969417
          Length = 1646

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +1

Query: 388  LRELPLK*ACRNEVPSMQGFPSTEHFSLHGSK-FLASV 498
            L +LPLK   R  +PSM  F ST+ +S+HG K F A++
Sbjct: 1064 LADLPLKNYYRFVLPSMDDFSSTD-YSVHGPKAFFANM 1100


>04_03_0316 + 14261942-14262506,14262710-14263134
          Length = 329

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -1

Query: 490 PRTSSRGEK--SAPSKETPACWVPHSCKLTSKEVPGETINLQTCLRCPVNYPWLNDPTGD 317
           PR+S+ G    S P +   A     + ++    VPG   +  TC   P+  P  + PT  
Sbjct: 197 PRSSNSGTSITSLPPRTYRAVREEFAAQVKLPVVPGNATDPFTCFSAPLRGPKPDVPTMA 256

Query: 316 GHY*GAMISSP 284
            H+ GA +  P
Sbjct: 257 LHFEGATMRLP 267


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,685,343
Number of Sequences: 37544
Number of extensions: 441640
Number of successful extensions: 971
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)