Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_H18
         (823 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    26   1.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.8  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    25   3.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   3.7  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   4.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   6.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 407 SELAGMRYPACRGFLRRSTFLSTARSSWLQSR 502
           S  +G R+P+CR    R    ST  +SW +SR
Sbjct: 261 SPRSGGRWPSCRSPPARRRSRSTRPTSWPRSR 292


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 425 SFLQAHFKGSSRRNHQFTNLFEMPSQ-LPLVKRPHGRWPLLRSHDLE 288
           ++L+     S R  H F  L  +  Q + +++R  GRW  L+  D+E
Sbjct: 804 TYLKIPKDSSIRAGHDF--LLAIQEQCVTVIERQQGRWKALKPFDIE 848


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 425 SFLQAHFKGSSRRNHQFTNLFEMPSQ-LPLVKRPHGRWPLLRSHDLE 288
           ++L+     S R  H F  L  +  Q + +++R  GRW  L+  D+E
Sbjct: 805 TYLKIPKDSSIRAGHDF--LLAIQEQCVTVIERQQGRWKALKPFDIE 849


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 512 NPRTVTEAKNFEPWREKCSVEGNP 441
           NP   T+ + F  W E C++  NP
Sbjct: 324 NPGPQTQTEGFYSWAEVCAMLPNP 347


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 594  LVLDRRDPSKPQRRLLRYHDTSDPM 520
            L    +DP  PQ R   YH T  P+
Sbjct: 1258 LTAQHQDPRGPQGRSTDYHATQQPL 1282


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 797 LTDVGPKXRRYYPDVPW*ILAL 732
           +  +G   R YYP V W IL +
Sbjct: 202 MVKIGIDLREYYPSVEWDILGV 223


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 673 RTEPSTFRTLFPCSLVEKQPLNFWKLSCIG*TRSFKATTTFTSL 542
           R EP T R +  C  V   P+N  K +  G  +  + +TT + +
Sbjct: 365 RVEPGTGRWVPICEPVYSNPINNMKSALTGELKICRLSTTVSGV 408


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,539
Number of Sequences: 2352
Number of extensions: 16586
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)