Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_H14
(819 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 68 8e-12
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 68 8e-12
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 68 8e-12
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 66 2e-11
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 66 2e-11
03_01_0034 + 318432-318825,318902-319851 66 2e-11
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 66 2e-11
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 66 4e-11
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 45 6e-05
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 45 6e-05
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 45 8e-05
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 45 8e-05
02_05_1127 + 34292894-34293284,34293948-34295443 29 3.4
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516... 29 4.4
07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743... 29 5.9
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 28 7.8
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 68.1 bits (159), Expect = 8e-12
Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -2
Query: 818 DIPPX-VSXRPHLHRXSTAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
DIPP +S ST+IQE+F+R+S QFTAMFRRKAFLHWYTGEG
Sbjct: 535 DIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 582
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3
Query: 679 GMDEMEFTEAESNMNDLVSEYQQY 608
GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 582 GMDEMEFTEAESNMNDLVSEYQQY 605
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 68.1 bits (159), Expect = 8e-12
Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -2
Query: 818 DIPPX-VSXRPHLHRXSTAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
DIPP +S ST+IQE+F+R+S QFTAMFRRKAFLHWYTGEG
Sbjct: 376 DIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 423
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3
Query: 679 GMDEMEFTEAESNMNDLVSEYQQY 608
GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 423 GMDEMEFTEAESNMNDLVSEYQQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 68.1 bits (159), Expect = 8e-12
Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -2
Query: 818 DIPPX-VSXRPHLHRXSTAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
DIPP +S ST+IQE+F+R+S QFTAMFRRKAFLHWYTGEG
Sbjct: 355 DIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3
Query: 679 GMDEMEFTEAESNMNDLVSEYQQY 608
GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 402 GMDEMEFTEAESNMNDLVSEYQQY 425
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -2
Query: 818 DIPPX-VSXRPHLHRXSTAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
DIPP + ST+IQE+F+R+S QFTAMFRRKAFLHWYTGEG
Sbjct: 355 DIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/68 (42%), Positives = 33/68 (48%)
Frame = -3
Query: 811 PLGFQXGRTFIGTXXXXXXXXXXXXXXXXXXSGARLSCIGTPARGMDEMEFTEAESNMND 632
P+G + TFIG + GMDEMEFTEAESNMND
Sbjct: 358 PIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 631 LVSEYQQY 608
LV+EYQQY
Sbjct: 418 LVAEYQQY 425
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -2
Query: 818 DIPPX-VSXRPHLHRXSTAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
DIPP + ST+IQE+F+R+S QFTAMFRRKAFLHWYTGEG
Sbjct: 355 DIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 679 GMDEMEFTEAESNMNDLVSEYQQY 608
GMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 402 GMDEMEFTEAESNMNDLVAEYQQY 425
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -2
Query: 818 DIPPX-VSXRPHLHRXSTAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
DIPP + ST+IQE+F+R+S QFTAMFRRKAFLHWYTGEG
Sbjct: 355 DIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3
Query: 679 GMDEMEFTEAESNMNDLVSEYQQY 608
GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 402 GMDEMEFTEAESNMNDLVSEYQQY 425
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -2
Query: 818 DIPPX-VSXRPHLHRXSTAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
DIPP + ST+IQE+F+R+S QFTAMFRRKAFLHWYTGEG
Sbjct: 355 DIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 679 GMDEMEFTEAESNMNDLVSEYQQY 608
GMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 402 GMDEMEFTEAESNMNDLVAEYQQY 425
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 65.7 bits (153), Expect = 4e-11
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -2
Query: 818 DIPPX-VSXRPHLHRXSTAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
DIPP +S ST+IQE+F+R+S QFTAMFRRKAFLHWYT EG
Sbjct: 371 DIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEG 418
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -3
Query: 685 ARGMDEMEFTEAESNMNDLVSEYQQY 608
+ GMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 416 SEGMDEMEFTEAESNMNDLVAEYQQY 441
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 45.2 bits (102), Expect = 6e-05
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -2
Query: 773 STAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
+TA+ E+F RI +F M+ ++AF+HWY GEG
Sbjct: 381 NTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 412
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 45.2 bits (102), Expect = 6e-05
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -2
Query: 773 STAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
+TA+ E+F RI +F M+ ++AF+HWY GEG
Sbjct: 462 NTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEG 493
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 44.8 bits (101), Expect = 8e-05
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -2
Query: 773 STAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
ST++ E+F RI +F M+ ++AF+HWY GEG
Sbjct: 381 STSVVEVFSRIDIKFDLMYSKRAFVHWYVGEG 412
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 44.8 bits (101), Expect = 8e-05
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -2
Query: 773 STAIQELFKRISXQFTAMFRRKAFLHWYTGEG 678
ST++ E+F RI +F M+ ++AF+HWY GEG
Sbjct: 381 STSVVEVFSRIDHKFDLMYSKRAFVHWYVGEG 412
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 571 RQTLRPRRRWPPGTVGTRRQG 633
R T +P+RRWPPG+ G +G
Sbjct: 83 RATGQPKRRWPPGSSGGGARG 103
>08_02_1050 +
23949828-23949981,23950083-23950534,23951599-23951631,
23952069-23952179,23953175-23953348
Length = 307
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 553 SPAPAPRQTLRPRRRWPP 606
SP+P+P + P RRWPP
Sbjct: 27 SPSPSPLLSRAPSRRWPP 44
>07_03_1027 -
23371826-23372006,23372110-23372171,23372595-23374335,
23374609-23374704,23374967-23375043,23376807-23377307
Length = 885
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 550 RSPAPAPRQTLRPRRRWPPGTVGT 621
R+PAP PR+ +R R R P V T
Sbjct: 31 RAPAPPPREVVRVRLRLTPAPVAT 54
>09_04_0076 +
14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 782 HRXSTAIQELFKRISXQFTAM-FRRKAFLHWYTGEGHGRDG 663
H+ +QE + Q T RKAFLH + EGH + G
Sbjct: 390 HQLQAQLQEQHLKGQSQLTISDIARKAFLHSHFMEGHAKSG 430
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,936,790
Number of Sequences: 37544
Number of extensions: 330916
Number of successful extensions: 1006
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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