Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_H07
         (775 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0855 - 32271631-32271712,32271823-32271922,32272012-322720...    68   1e-11
01_03_0268 + 14436631-14436756,14436866-14436929,14437001-144371...    62   4e-10
06_01_0762 + 5699619-5699744,5699831-5699891,5699979-5700078,570...    49   5e-06
08_02_0064 - 11848060-11848476,11848518-11849090                       31   1.0  
07_03_0124 - 13723597-13724657,13726179-13726413                       28   7.2  
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13...    28   7.2  
11_04_0208 - 14871412-14872198,14872932-14873206,14873819-14873851     28   9.5  

>02_05_0855 -
           32271631-32271712,32271823-32271922,32272012-32272072,
           32272169-32272294
          Length = 122

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
 Frame = -2

Query: 627 LKSDALFAKIQDEVKKNPDKATT--VGGVFLYNITDNGKTVKQ--WTLDLKSPVVHDGAP 460
           LKS AL  +++  +     K     +G V+  NI+       +  + +DLK  VV  G P
Sbjct: 6   LKSAALLEQLRVHLASGAGKELVEKIGFVYQLNISPKKLAFDEEVFVVDLKKGVVSKG-P 64

Query: 459 KSGKADTTMTIADADLVQIASGALNPQVAYMKGKLKIAGNIMLAQKLGP 313
             GK D T +  D D + I+SG LNPQ+A++ GKLKI G+I  AQK  P
Sbjct: 65  YEGKPDATFSFTDDDFLAISSGKLNPQMAFIMGKLKIKGSISAAQKFTP 113


>01_03_0268 +
           14436631-14436756,14436866-14436929,14437001-14437100,
           14437187-14437478
          Length = 193

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
 Frame = -2

Query: 627 LKSDALFAKIQDEVKKNPDKATT--VGGVFLYNITDNGKTVKQWT---LDLKSPVVHDGA 463
           LKS AL  ++   +     K     +G V+  NI+       +     +DLK  VV  G 
Sbjct: 6   LKSAALLEQLHVHLASGAGKELVEMIGFVYQLNISPKKLGFDEEVFIVVDLKKGVVSKG- 64

Query: 462 PKSGKADTTMTIADADLVQIASGALNPQVAYMKGKLKIAGNIMLAQKLGP 313
           P  GK D T +  D D + I+SG LNPQ+ ++ GKLKI G+I  AQK  P
Sbjct: 65  PYEGKPDATFSFTDDDFLAISSGKLNPQMVFIMGKLKIKGSISAAQKFTP 114


>06_01_0762 +
           5699619-5699744,5699831-5699891,5699979-5700078,
           5700436-5700560,5700631-5700706,5701122-5701164
          Length = 176

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -2

Query: 573 DKATTVGGVFLYNITDN--GKTVKQWTLDLKSPVVHDGAPKSGKADTTMTIADADLVQIA 400
           D A  VG V+ +NI     G   + + +DLK   V  G P  GK D T +  D+D + IA
Sbjct: 26  DIAKKVGLVYQFNIAPKKIGVDEEIFVVDLKKGEVTKG-PYEGKPDATFSFTDSDFLSIA 84

Query: 399 SGALNPQVAYMK 364
           +G +NPQ+A+++
Sbjct: 85  TGKMNPQIAFIR 96


>08_02_0064 - 11848060-11848476,11848518-11849090
          Length = 329

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -2

Query: 597 QDEVKKNPDKATTVGGVFLYNITDNGKTVKQWTLDLKSPVVHDGAPKSGKADTTMT 430
           +D + + P  AT  G VFL+   D      Q     ++ +  +G P  G+ D TMT
Sbjct: 85  RDAILRQPRLATASGRVFLFRPWDESLHGVQVRYRYRARLCIEGVPMHGRIDETMT 140


>07_03_0124 - 13723597-13724657,13726179-13726413
          Length = 431

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 488 LRSSVHCFTVFPLSVMLYKKTPPTVVALSGFFFTSSWIFAKSAS 619
           L  ++  F V P SV+L  + PP        FFTS  +F+   S
Sbjct: 332 LAEAIAQFKVLPFSVLLSSQCPPGCEGSLFAFFTSGLVFSAIVS 375


>05_01_0019 -
           129767-129931,130078-130257,130491-130728,130833-131236,
           131284-131427,131709-131995,132071-132150,132563-132714,
           132793-132909,133292-133450,133546-133946,134106-134423,
           135050-135095,135203-135310
          Length = 932

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 322 FLGEHDVACDFKFSFHVCNLRIESSRCNL 408
           FL   D  C++ F    CN+    ++CN+
Sbjct: 772 FLSVKDCNCEYNFRTDFCNVHFSQNKCNV 800


>11_04_0208 - 14871412-14872198,14872932-14873206,14873819-14873851
          Length = 364

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 389 SILKLHT*KENLKSQATSCSPKNLDLCSNQMLNCETINLTIKNN 258
           S++ LH    +LKS      PK L+LC+ ++ +CE  NL  K++
Sbjct: 271 SVVDLH----DLKSYMMGFDPKTLELCA-RLRSCEASNLIEKHS 309


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,714,262
Number of Sequences: 37544
Number of extensions: 387585
Number of successful extensions: 816
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)