Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_H06
(833 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 75 1e-13
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 75 1e-13
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 75 1e-13
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 75 1e-13
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 75 1e-13
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 75 1e-13
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 75 1e-13
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 75 1e-13
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 75 1e-13
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 75 1e-13
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 75 1e-13
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 75 1e-13
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 75 1e-13
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 75 2e-13
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 75 2e-13
AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p pro... 50 5e-06
AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-P... 50 5e-06
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 46 8e-05
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 46 8e-05
M14645-1|AAA28987.1| 450|Drosophila melanogaster protein ( D.me... 44 3e-04
M14644-1|AAA28986.1| 449|Drosophila melanogaster protein ( D.me... 44 3e-04
M14643-1|AAA28985.1| 450|Drosophila melanogaster protein ( D.me... 44 3e-04
BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p pro... 44 3e-04
BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p pro... 44 3e-04
BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p pro... 44 3e-04
AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p pro... 44 3e-04
AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p pro... 44 3e-04
AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA... 44 3e-04
AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,... 44 3e-04
AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,... 44 3e-04
AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA ... 44 3e-04
L14768-1|AAB39774.1| 1429|Drosophila melanogaster expanded protein. 30 3.4
AY069068-1|AAL39213.1| 1427|Drosophila melanogaster GH08582p pro... 30 3.4
AE014134-106|AAF51495.1| 1427|Drosophila melanogaster CG4114-PA ... 30 3.4
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 371 QFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 411
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 390 QFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 430
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 390 QFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 430
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 390 QFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 430
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 312 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 352
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 312 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 352
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 393 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 433
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DLVSEYQQ
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 74.5 bits (175), Expect = 2e-13
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DL+SEYQQ
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQ 424
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 74.5 bits (175), Expect = 2e-13
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -3
Query: 753 QXPXMFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
Q MFRRKA LHWY GEGMDEMEF EAESNM DL+SEYQQ
Sbjct: 449 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQ 489
>AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p
protein.
Length = 462
Score = 49.6 bits (113), Expect = 5e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQ 634
M RRKA LHWY GEGM+E EF +A+ + ++ +Y+
Sbjct: 387 MLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYR 422
>AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-PA
protein.
Length = 462
Score = 49.6 bits (113), Expect = 5e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQ 634
M RRKA LHWY GEGM+E EF +A+ + ++ +Y+
Sbjct: 387 MLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYR 422
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 45.6 bits (103), Expect = 8e-05
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
MF+++A +HWY GEGM+E EF EA N+ L ++++
Sbjct: 409 MFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEE 445
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 45.6 bits (103), Expect = 8e-05
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
MF+++A +HWY GEGM+E EF EA N+ L ++++
Sbjct: 409 MFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEE 445
>M14645-1|AAA28987.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-3), complete
cds. ).
Length = 450
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>M14644-1|AAA28986.1| 449|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-2), complete
cds. ).
Length = 449
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE 434
>M14643-1|AAA28985.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-1), complete
cds. ).
Length = 450
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p
protein.
Length = 450
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p
protein.
Length = 450
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p
protein.
Length = 450
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p
protein.
Length = 449
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE 434
>AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p
protein.
Length = 450
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA
protein.
Length = 449
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE 434
>AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,
isoform B protein.
Length = 450
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,
isoform A protein.
Length = 450
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA
protein.
Length = 450
Score = 44.0 bits (99), Expect = 3e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 741 MFRRKAXLHWYPGEGMDEMEFPEAESNMXDLVSEYQQ 631
M+ ++A +HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>L14768-1|AAB39774.1| 1429|Drosophila melanogaster expanded protein.
Length = 1429
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 560 SCPRSPAPAPRQTLRPRRRWPPGYCWYSETRSXMLLSASGNSISSMPSP 706
S P PAP P RRR PP Y S+ R L+S S S+ P+P
Sbjct: 824 SPPVPPAPIPAPPPAIRRRDPPPYSISSKPRPTSLISVSS---SAHPAP 869
>AY069068-1|AAL39213.1| 1427|Drosophila melanogaster GH08582p
protein.
Length = 1427
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 560 SCPRSPAPAPRQTLRPRRRWPPGYCWYSETRSXMLLSASGNSISSMPSP 706
S P PAP P RRR PP Y S+ R L+S S S+ P+P
Sbjct: 824 SPPVPPAPIPAPPPAIRRRDPPPYSISSKPRPTSLISVSS---SAHPAP 869
>AE014134-106|AAF51495.1| 1427|Drosophila melanogaster CG4114-PA
protein.
Length = 1427
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 560 SCPRSPAPAPRQTLRPRRRWPPGYCWYSETRSXMLLSASGNSISSMPSP 706
S P PAP P RRR PP Y S+ R L+S S S+ P+P
Sbjct: 824 SPPVPPAPIPAPPPAIRRRDPPPYSISSKPRPTSLISVSS---SAHPAP 869
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,584,911
Number of Sequences: 53049
Number of extensions: 505598
Number of successful extensions: 1232
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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