Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_G24
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical ... 115 4e-26
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 103 1e-22
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 103 2e-22
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 103 2e-22
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical ... 48 9e-06
U88178-6|ABA03112.1| 312|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 33 0.37
AL032626-11|CAC44300.1| 140|Caenorhabditis elegans Hypothetical... 32 0.65
AL032626-10|CAA21531.1| 458|Caenorhabditis elegans Hypothetical... 32 0.65
AC024765-1|AAF60529.2| 300|Caenorhabditis elegans Prion-like-(q... 30 2.6
AF106582-2|AAC78213.1| 457|Caenorhabditis elegans Hypothetical ... 29 3.4
AF039716-2|AAB96737.1| 462|Caenorhabditis elegans Hypothetical ... 29 3.4
AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical... 29 3.4
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 29 4.5
Z46241-2|CAA86315.1| 144|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z46241-1|CAA86323.1| 462|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical pr... 28 7.9
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 7.9
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.9
AY273823-1|AAQ01772.1| 1040|Caenorhabditis elegans VAB-19 protein. 28 7.9
AC006688-1|AAF39969.3| 1040|Caenorhabditis elegans Variable abno... 28 7.9
>AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical
protein Y51F10.8 protein.
Length = 204
Score = 115 bits (277), Expect = 4e-26
Identities = 55/121 (45%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Frame = -1
Query: 683 LKTKVFEACVLHVMTYGAETWTLTVGLVRKFKVVQRAMERCMLGVYLMD-RVRN---EEI 516
L+ +F++ VL +TYG+E WT T LV + +V A+ER ++G+ L + R RN EE+
Sbjct: 46 LRANLFDSTVLPALTYGSEAWTFTKELVERVRVTHAALERKLVGLTLTEQRERNIHREEV 105
Query: 515 HQRTKVTDIALKISKRKWQWAGHTCRRSDGRWSRSVLDWRPRTGKRSVGRPLARWTGSLR 336
+++K+ D + I KRK WAGH RR+DGRW+ + DW PR KR VGRP RW SLR
Sbjct: 106 REKSKLRDPLIHIKKRKLGWAGHVARRTDGRWTTLMNDWCPRDEKRPVGRPPMRWNDSLR 165
Query: 335 R 333
+
Sbjct: 166 K 166
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 103 bits (248), Expect = 1e-22
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Frame = -1
Query: 683 LKTKVFEACVLHVMTYGAETWTLTVGLVRKFKVVQRAMERCMLGVYLMDR----VRNEEI 516
++ +F++ VL +TYG+E WT T L + ++ ++ER ++G+ L + + E+I
Sbjct: 261 IRANLFDSIVLPALTYGSEAWTFTKALSERVRITHASLERRLVGITLTQQRERDLHREDI 320
Query: 515 HQRTKVTDIALKISKRKWQWAGHTCRRSDGRWSRSVLDWRPRTGKRSVGRPLARWTGSLR 336
+ + V D + KRK WAGH RR DGRW+ + +WRP KR VGRP RWT SLR
Sbjct: 321 RKMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRWTDSLR 380
Query: 335 R 333
+
Sbjct: 381 K 381
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 103 bits (246), Expect = 2e-22
Identities = 47/121 (38%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Frame = -1
Query: 683 LKTKVFEACVLHVMTYGAETWTLTVGLVRKFKVVQRAMERCMLGVYLMDR----VRNEEI 516
++ +F++ VL +TYG+E WT T L + ++ ++ER ++G+ L + + E+I
Sbjct: 910 IRANLFDSIVLPALTYGSEAWTFTKALSERVRITHASLERRLVGITLTQQRERDLHREDI 969
Query: 515 HQRTKVTDIALKISKRKWQWAGHTCRRSDGRWSRSVLDWRPRTGKRSVGRPLARWTGSLR 336
+ V D + KRK WAGH RR DGRW+ + +WRP KR VGRP RWT SLR
Sbjct: 970 RTMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRWTDSLR 1029
Query: 335 R 333
+
Sbjct: 1030 K 1030
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 103 bits (246), Expect = 2e-22
Identities = 47/121 (38%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Frame = -1
Query: 683 LKTKVFEACVLHVMTYGAETWTLTVGLVRKFKVVQRAMERCMLGVYLMDR----VRNEEI 516
++ +F++ VL +TYG+E WT T L + ++ ++ER ++G+ L + + E+I
Sbjct: 649 IRANLFDSIVLPALTYGSEAWTFTKALSERVRITHASLERRLVGITLTQQRERDLHREDI 708
Query: 515 HQRTKVTDIALKISKRKWQWAGHTCRRSDGRWSRSVLDWRPRTGKRSVGRPLARWTGSLR 336
+ V D + KRK WAGH RR DGRW+ + +WRP KR VGRP RWT SLR
Sbjct: 709 RTMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRWTDSLR 768
Query: 335 R 333
+
Sbjct: 769 K 769
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical protein
F20B4.7 protein.
Length = 891
Score = 102 bits (245), Expect = 3e-22
Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Frame = -1
Query: 683 LKTKVFEACVLHVMTYGAETWTLTVGLVRKFKVVQRAMERCMLGVYLMDR----VRNEEI 516
++ +F++ +L +TYG+E WT T L + ++ ++ER ++G+ L + + E+I
Sbjct: 735 IRANLFDSIILPALTYGSEAWTFTKALSERVRITHASLERRLVGITLTQQRERDLHREDI 794
Query: 515 HQRTKVTDIALKISKRKWQWAGHTCRRSDGRWSRSVLDWRPRTGKRSVGRPLARWTGSLR 336
+ V D + KRK WAGH RR DGRW+ + +WRP KR VGRP RWT SLR
Sbjct: 795 RTMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLMTEWRPYGWKRPVGRPPMRWTDSLR 854
Query: 335 R 333
+
Sbjct: 855 K 855
>AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical
protein F21E9.5 protein.
Length = 864
Score = 48.0 bits (109), Expect = 9e-06
Identities = 23/72 (31%), Positives = 44/72 (61%)
Frame = -1
Query: 683 LKTKVFEACVLHVMTYGAETWTLTVGLVRKFKVVQRAMERCMLGVYLMDRVRNEEIHQRT 504
L+ +F++ VL +TYG+E WT T L + +V A+ER ++G+ L ++ R IH+
Sbjct: 683 LRANLFDSTVLPALTYGSEAWTFTKELAERVRVTHAALERKLVGLTLTEQ-RKRNIHRE- 740
Query: 503 KVTDIALKISKR 468
++++++S R
Sbjct: 741 ---EMSVRVSDR 749
>U88178-6|ABA03112.1| 312|Caenorhabditis elegans Hypothetical
protein W09C3.8 protein.
Length = 312
Score = 38.3 bits (85), Expect = 0.007
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = -1
Query: 671 VFEACVLHVMTYGAETWTLTVGLVRKFKVVQRAMERCMLGVYLMDRVRNEEIHQRTKVTD 492
+F+ VL + Y +ETWT G + K + + G+ +R + +
Sbjct: 159 LFKQNVLPALLYASETWTCNAGSTLRLK-------KTVTGLIDAAEIRGWNFNLERYL-- 209
Query: 491 IALKISKRKWQWAGHTCRRSDGRWSRSVLDWRP---RTGKRSVGRPLARW 351
++K+ ++AGH RR RW++ +W P + KR+VG RW
Sbjct: 210 ----LAKQS-RFAGHILRRDPNRWTKICTEWDPSHNKNWKRAVGGQKKRW 254
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +3
Query: 309 PHPISPSIS---PQATGPTGKGTPNAALTGTWSPVQNTSAPTAIASATCMSGPLPFPLA 476
P P+ P +S PQA PT T +A TG +P T+APT + P P A
Sbjct: 1514 PQPVVPQVSIVTPQAPQPTAAAT--SASTGPIAPEPTTAAPTTTETTPLPPSLAPHPPA 1570
>AL032626-11|CAC44300.1| 140|Caenorhabditis elegans Hypothetical
protein Y37D8A.12b protein.
Length = 140
Score = 31.9 bits (69), Expect = 0.65
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 321 SPSISPQATGPTGKGTPNAALTGTWSPVQNTSAPTAIASA---TCMSG 455
+P+ SP AT P G T N +T +P NT+ ++SA TC +G
Sbjct: 41 APTKSPNATAPAGNSTKNVNVT---APAANTTQLALVSSASPQTCKNG 85
>AL032626-10|CAA21531.1| 458|Caenorhabditis elegans Hypothetical
protein Y37D8A.12a protein.
Length = 458
Score = 31.9 bits (69), Expect = 0.65
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 321 SPSISPQATGPTGKGTPNAALTGTWSPVQNTSAPTAIASA---TCMSG 455
+P+ SP AT P G T N +T +P NT+ ++SA TC +G
Sbjct: 41 APTKSPNATAPAGNSTKNVNVT---APAANTTQLALVSSASPQTCKNG 85
>AC024765-1|AAF60529.2| 300|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 82
protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Frame = +1
Query: 274 PIVRRNERSSAFR--IQSLPAYRRKLPVQRA-----RGRPTLRLPVRGLQSRTLLLQR 426
P+ ++N + R I ++P +R++P QR G P LRLPV +Q L Q+
Sbjct: 77 PVQQQNRQRQVIRQIIPTVPQVQRQMPQQRPPQQTQNGAPMLRLPVHQIQQAHHLQQQ 134
>AF106582-2|AAC78213.1| 457|Caenorhabditis elegans Hypothetical
protein W05F2.2 protein.
Length = 457
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 333 SPQATGPTGKGTPNAALTGTWSPVQNTSAPTAIASA---TCMSG 455
SP AT P G T N +T +P NT+ ++SA TC +G
Sbjct: 49 SPNATAPAGNSTKNVNVT---APAANTTQLALVSSASPQTCKNG 89
>AF039716-2|AAB96737.1| 462|Caenorhabditis elegans Hypothetical
protein W03G9.3 protein.
Length = 462
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 333 SPQATGPTGKGTPNAALTGTWSPVQNTSAPTAIASA---TCMSG 455
SP AT P G T N +T +P NT+ ++SA TC +G
Sbjct: 49 SPNATAPAGNSTKNVNVT---APAANTTQLALVSSASPQTCKNG 89
>AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical
protein Y54E10A.13 protein.
Length = 165
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 306 LPHPISPSISPQATGPTGKGTPNAALTGTWSPVQNTSAPTAIASATCMSGP 458
LP P SPSI ++ PT G T S ++ + IA T S P
Sbjct: 97 LPRPSSPSIRSNSSVPTASGGARNGSPSTRSSTSSSIQGSPIAPTTSASQP 147
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 306 LPHPISPSISPQATGPTGKGTPNAALTGTWSPVQNTSAP-TAIASATCMSGPL 461
LP P P +P GP GK N + P + P T C GPL
Sbjct: 260 LPGPAGPPGAPGRPGPPGKAGANGLPGNSGKPTKRPCNPVTKPPCVPCPQGPL 312
>Z46241-2|CAA86315.1| 144|Caenorhabditis elegans Hypothetical
protein C38D4.1b protein.
Length = 144
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 333 SPQATGPTGKGTPNAALTGTWSPVQNTSAPTAIASA---TCMSG 455
SP AT P G T N +T +P NT+ ++SA TC +G
Sbjct: 49 SPNATAPAGNPTKNVNVT---APAANTTQLALVSSASPQTCKNG 89
>Z46241-1|CAA86323.1| 462|Caenorhabditis elegans Hypothetical
protein C38D4.1a protein.
Length = 462
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 333 SPQATGPTGKGTPNAALTGTWSPVQNTSAPTAIASA---TCMSG 455
SP AT P G T N +T +P NT+ ++SA TC +G
Sbjct: 49 SPNATAPAGNPTKNVNVT---APAANTTQLALVSSASPQTCKNG 89
>Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical
protein T01H3.2 protein.
Length = 980
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 495 GYFGSLMDFFISDSIHQINSEHTPF--HSTLNDFELTDQ 605
G GS+ S +++ ++S + P HST +D+++TDQ
Sbjct: 626 GVKGSVWAINQSGNLYSLSSNYNPLSSHSTTHDYKMTDQ 664
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 264 VGLSHSPPQ*TILRLPHPISPSISPQATGPTGKGTPNAALTGTWSPVQNTSAPTAIASAT 443
VG S + P P++P+ S T PT P + T P T+ PT S T
Sbjct: 636 VGTSPTAPANLTTPTTAPVNPTSS--TTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 693
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 264 VGLSHSPPQ*TILRLPHPISPSISPQATGPTGKGTPNAALTGTWSPVQNTSAPTAIASAT 443
VG S + P P++P+ S T PT P + T P T+ PT S T
Sbjct: 692 VGTSPTAPANLTTPTTAPVNPTSS--TTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 749
>AY273823-1|AAQ01772.1| 1040|Caenorhabditis elegans VAB-19 protein.
Length = 1040
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +3
Query: 321 SPSISPQATGPTGKGTPNAALT-GTWSPVQNTSAPTAIASATCMSGPLPFP 470
S S SP P P L+ G+ SP P S +GPLP P
Sbjct: 360 STSTSPPPQAPASAFEPVKPLSNGSPSPTHQVQKPIVTRSIAVSTGPLPAP 410
>AC006688-1|AAF39969.3| 1040|Caenorhabditis elegans Variable
abnormal morphology protein19 protein.
Length = 1040
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +3
Query: 321 SPSISPQATGPTGKGTPNAALT-GTWSPVQNTSAPTAIASATCMSGPLPFP 470
S S SP P P L+ G+ SP P S +GPLP P
Sbjct: 360 STSTSPPPQAPASAFEPVKPLSNGSPSPTHQVQKPIVTRSIAVSTGPLPAP 410
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,720,092
Number of Sequences: 27780
Number of extensions: 409353
Number of successful extensions: 1252
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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