Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_G21
         (816 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0083 + 27580710-27580767,27580869-27580924,27581024-275811...    55   8e-08

>05_07_0083 +
           27580710-27580767,27580869-27580924,27581024-27581133,
           27582083-27582148,27582149-27582278,27582636-27582737,
           27582969-27583010,27583153-27583194,27583356-27583432,
           27583730-27583856,27583953-27584120,27584359-27584484,
           27584575-27584685,27584776-27584910,27585540-27585614,
           27585827-27585934,27586015-27586101,27586187-27586273,
           27586762-27586830
          Length = 591

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 35/105 (33%), Positives = 49/105 (46%)
 Frame = -3

Query: 655 SRGEXFTXLGV*IGDVPAAHIFNPKXLEFQVVRTLXLPGXLXTXAANKKXPLPLELFEIS 476
           SR E F  L        A  I NP+  EF+VVRT  +   L T   N   P P+++FE+ 
Sbjct: 421 SREENFDMLNRTQDVNKAVIIANPRTSEFEVVRTSLMSCLLKTLKHNIDHPRPIKIFEVG 480

Query: 475 XVVXLXXXXXXGAXXXRGXXGVXFGGAAGXQXVHGLVDRVMGXLR 341
            VV L      GA   R    +     +G + + GLVDR++  +R
Sbjct: 481 DVVTLDGSRDVGASNNRRLAALYCNKQSGFEEIMGLVDRIVNVVR 525


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,178,420
Number of Sequences: 37544
Number of extensions: 178315
Number of successful extensions: 204
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)