Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_G21
         (816 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50044-8|CAA90360.1|  591|Caenorhabditis elegans Hypothetical pr...    80   2e-15
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   7.0  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   7.0  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   7.0  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    28   7.0  

>Z50044-8|CAA90360.1|  591|Caenorhabditis elegans Hypothetical
           protein F22B5.9 protein.
          Length = 591

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 40/89 (44%), Positives = 51/89 (57%)
 Frame = -3

Query: 604 AAHIFNPKXLEFQVVRTLXLPGXLXTXAANKKXPLPLELFEISXVVXLXXXXXXGAXXXR 425
           A HI NPK LEFQV RT  LPG L T ++N+  PLPL+LFE+  V+        GA   R
Sbjct: 437 AVHIGNPKTLEFQVARTSLLPGLLKTLSSNRDMPLPLKLFELQDVIVKDSNTDVGARNER 496

Query: 424 GXXGVXFGGAAGXQXVHGLVDRVMGXLRV 338
               V +  AAG + + G +DR+M  L V
Sbjct: 497 RLAAVYYNRAAGFEIIQGFLDRIMRMLNV 525



 Score = 36.3 bits (80), Expect = 0.026
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 288 FPGXCAEXVXX-GKVXGKXGVIXPXXLTAFXXXXPXFAVXIDXXPF 154
           FPG CA+ +   G V G  G + P  +T+F    P  AV I+  PF
Sbjct: 545 FPGRCAKIIGPKGVVLGHIGALHPEVITSFGLTLPCGAVEINVEPF 590


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = -3

Query: 796 PXXGGGPXPXPXXXXRKRPPPXKIXGXXXGKGGPAP 689
           P  GG P P P       PPP    G    KGGP P
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGF--KGGPPP 786


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = -3

Query: 796 PXXGGGPXPXPXXXXRKRPPPXKIXGXXXGKGGPAP 689
           P  GG P P P       PPP    G    KGGP P
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGF--KGGPPP 786


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = -3

Query: 796 PXXGGGPXPXPXXXXRKRPPPXKIXGXXXGKGGPAP 689
           P  GG P P P       PPP    G    KGGP P
Sbjct: 336 PISGGPPPPPPPPGGCPPPPPPPPPGGF--KGGPPP 369


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 4/37 (10%)
 Frame = -3

Query: 787 GGGPX----PXPXXXXRKRPPPXKIXGXXXGKGGPAP 689
           G GP     P P       PPP    G   G GGP P
Sbjct: 763 GAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPP 799


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,046,877
Number of Sequences: 27780
Number of extensions: 130815
Number of successful extensions: 197
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)