Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_G20
         (799 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0389 - 33567385-33567969,33568052-33568402,33568646-335688...    30   1.9  
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484           30   2.5  
05_01_0522 - 4506667-4507254,4507474-4507824,4507967-4508163,450...    29   4.3  
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662...    28   9.9  
02_02_0714 - 13222425-13223605,13224422-13224548,13225417-132254...    28   9.9  

>03_06_0389 -
           33567385-33567969,33568052-33568402,33568646-33568848,
           33569044-33569299,33569459-33569671,33569757-33569882,
           33569965-33570102,33570191-33570536,33570630-33570896,
           33571192-33571378,33571457-33571556,33571659-33571909,
           33572242-33572428,33572562-33572573
          Length = 1073

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = +1

Query: 382 RSAGPLSTGRRDRRLLYCGSRGWSKWKTSPGYRRGDRPGSLLIQFQQYQASWLEYACSP 558
           +SA P S  +    ++ CG    S W T  G+  G     +L  F+ +   W    C P
Sbjct: 734 QSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMP 792


>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
          Length = 663

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -1

Query: 574 TLLEELGYMHIQATKPDTVGIGLTDSPAGLLAY--ILEKFSTWTNPDFR 434
           T+L+EL  + I+  K D  GI    +P G++++  ILE +  + NPDF+
Sbjct: 561 TILDELLPISIEMAKRDCRGIWNFTNP-GVVSHNEILEMYKKYLNPDFK 608


>05_01_0522 -
           4506667-4507254,4507474-4507824,4507967-4508163,
           4508324-4508582,4508656-4508868,4508946-4509071,
           4509159-4509296,4509376-4509721,4509822-4510088,
           4510427-4510616,4510700-4510784,4510885-4511072,
           4511262-4511457,4512027-4512113
          Length = 1076

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/61 (24%), Positives = 25/61 (40%)
 Frame = +1

Query: 385 SAGPLSTGRRDRRLLYCGSRGWSKWKTSPGYRRGDRPGSLLIQFQQYQASWLEYACSPIP 564
           S  P S  +    ++ CG    ++W    G+  G     +L  F+ +   W+   C P P
Sbjct: 737 STNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMP-P 795

Query: 565 R 567
           R
Sbjct: 796 R 796


>10_08_0894 - 21365629-21365766,21365849-21365950,21366042-21366284,
            21366685-21366813,21366999-21367103,21367196-21367387,
            21367486-21367639,21368148-21368209,21368291-21368437,
            21368517-21368564,21369091-21369228,21369305-21369451,
            21370579-21370665,21370754-21370861,21370941-21371041,
            21371870-21371996,21372820-21372936,21373029-21373106,
            21373240-21373284,21373637-21373756,21373838-21373964,
            21374033-21374253,21374347-21374529,21374772-21374924,
            21375051-21375146,21375226-21375331,21375410-21375492,
            21375576-21375728,21375819-21376058,21376367-21376414,
            21376782-21376928,21377007-21377115,21377200-21377345,
            21377715-21377809,21377944-21378049,21378177-21378368,
            21378456-21378686,21378772-21378866,21379426-21379529,
            21380040-21380284,21380300-21380347,21380376-21380480,
            21380630-21380767,21381458-21381649,21381738-21381914,
            21382001-21382129,21382203-21382316,21382407-21382746,
            21382836-21383064,21383155-21383455,21384311-21384358,
            21387963-21388355
          Length = 2493

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -1

Query: 271  QVPXVGAPGEIRVSLPATLHPQX*STRNWSMPVSLKTEDISFRLNYRRSSP 119
            Q+P   +PG++ V+L A   P   ++ + S  VS   +   F L  R S+P
Sbjct: 1012 QMPLASSPGDLAVNLKAATTPSSQASPHHSTTVSAPLQPTGF-LRSRSSAP 1061


>02_02_0714 -
           13222425-13223605,13224422-13224548,13225417-13225461,
           13225776-13225840,13226138-13226264
          Length = 514

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 598 YPLSEKYSTLLEELGYMHIQATKPDTVGIG 509
           Y +S + STLLE+ G+ H     P+T+  G
Sbjct: 451 YSISPEESTLLEKYGWNHTVINDPETIRKG 480


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,905,550
Number of Sequences: 37544
Number of extensions: 451108
Number of successful extensions: 1318
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)