Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_G20
         (799 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    97   2e-22
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   5.7  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 96.7 bits (230), Expect = 2e-22
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = -1

Query: 772 GGDWGALIGSAMATFFPKGIIGFHSNMALTLSPAATFLEFVGALFPSLIVEPELANRLYP 593
           GGDWG++I S MA  FP+ IIG H+NM  +L+ +  F  FVG  FPSLI   E  ++ +P
Sbjct: 2   GGDWGSVIASDMAVLFPEKIIGLHNNMCTSLNLSNLFWLFVGTYFPSLIGANEHYSKFFP 61

Query: 592 LSEKYSTLLEELGYMHIQATKPDT 521
           +SE  S L+EE GY HIQATKPDT
Sbjct: 62  VSEILSFLIEESGYFHIQATKPDT 85


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 700 SNMALTLSPAATFLEFVGALFPSLIVEPELANRLYPLSEKYST 572
           S M  +LS     L F+  +   L+V PE+      +S  Y+T
Sbjct: 147 SMMIESLSHTTQDLVFIWNMTDPLVVNPEIELPQLDISNNYTT 189


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,699
Number of Sequences: 438
Number of extensions: 4324
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)