BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_G17
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 91 7e-19
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 90 2e-18
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 41 0.001
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 41 0.001
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 41 0.001
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 41 0.001
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 40 0.002
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 39 0.004
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 38 0.012
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 38 0.012
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 37 0.015
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 36 0.027
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 35 0.062
U97000-6|AAC47992.2| 134|Caenorhabditis elegans Hypothetical pr... 33 0.25
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 31 1.3
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 5.4
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 91.5 bits (217), Expect = 7e-19
Identities = 44/119 (36%), Positives = 63/119 (52%)
Frame = -2
Query: 616 GXFGLSXTGXLLIPGPSKEXXXXXXXXXXXXXXXXXXXVXCSLIPHLPRVTFTIAGNDFT 437
G ++ TG LI GP + + C +P LP V+F I G +F+
Sbjct: 292 GCQAIADTGTSLIAGPKAQIEAIQNFIGAEPLIKGEYMISCDKVPTLPPVSFVIGGQEFS 351
Query: 436 LEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXVXIGKXYTXFXAGNXXLGFA 260
L+G YVL+V+Q G T+CLSG M + +P+ +G LW LG V IG+ Y+ F +GFA
Sbjct: 352 LKGEDYVLKVSQGGKTICLSGFMGIDLPERVGELWILGDVFIGRYYSVFDFDQNRVGFA 410
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 90.2 bits (214), Expect = 2e-18
Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = -2
Query: 595 TGXLLIPGPSKEXXXXXXXXXXXXXXXXXXXVXCSLIPHLPRVTFTIAGNDFTLEGNXYV 416
TG L+ GP+ V CS IP LP +TF + G +F L+G Y+
Sbjct: 280 TGTSLLTGPTDVIKKIQHKIGGIPLFNGEYEVECSKIPSLPNITFNLGGQNFDLQGKDYI 339
Query: 415 LRVAQX-GHTVCLSGXMALXVPKPMGPLWXLGXVXIGKXYTXFXAGNXXLGFA 260
L+++ G + CLSG M + +P P GPLW LG V IG+ Y+ F GN +GFA
Sbjct: 340 LQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGRFYSVFDHGNKRVGFA 392
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS + P + FTI G F ++ YVL + Q G C ++ GP W LG
Sbjct: 313 CSTMKTQPDLIFTIGGAQFPVKSVEYVLDL-QLGGGKCALAVFSMG-SGGFGPSWILGDT 370
Query: 316 XIGKXYTXFXAGNXXLGFAPPV 251
I + + GN +GFA V
Sbjct: 371 FIRQYCNVYDIGNGQIGFATAV 392
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS + P + FTI G F ++ YVL + Q G C ++ GP W LG
Sbjct: 312 CSTMKTQPDLIFTIGGAQFPVKSVEYVLDL-QLGGGKCALAVFSMG-SGGFGPSWILGDT 369
Query: 316 XIGKXYTXFXAGNXXLGFAPPV 251
I + + GN +GFA V
Sbjct: 370 FIRQYCNVYDIGNGQIGFATAV 391
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS + P + FTI G F ++ YVL + Q G C ++ GP W LG
Sbjct: 313 CSTMKTQPDLIFTIGGAQFPVKSVEYVLDL-QLGGGKCALAVFSMG-SGGFGPSWILGDT 370
Query: 316 XIGKXYTXFXAGNXXLGFAPPV 251
I + + GN +GFA V
Sbjct: 371 FIRQYCNVYDIGNGQIGFATAV 392
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS + P + FTI G F ++ YVL + Q G C ++ GP W LG
Sbjct: 313 CSTMKTQPDLIFTIGGAQFPVKSVEYVLDL-QLGGGKCALAVFSMG-SGGFGPSWILGDT 370
Query: 316 XIGKXYTXFXAGNXXLGFAPPV 251
I + + GN +GFA V
Sbjct: 371 FIRQYCNVYDIGNGQIGFATAV 392
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/82 (29%), Positives = 33/82 (40%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS LP + FTI GN + + YV+ + LS + P GPLW G
Sbjct: 298 CSSTATLPDLVFTIGGNSYNVRAVEYVVNLNLPNGQCALS--LFGTFSSPSGPLWVFGDN 355
Query: 316 XIGKXYTXFXAGNXXLGFAPPV 251
+ F GN +G A +
Sbjct: 356 FLRSYCHIFDFGNSRIGLAKAI 377
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS + P + FTI G F ++ Y+L + L+ ++ + GP W LG V
Sbjct: 309 CSTMKTQPDLVFTIGGALFPVKSVEYILDIGLDEGKCALA--ISPLMASGFGPSWILGDV 366
Query: 316 XIGKXYTXFXAGNXXLGFA 260
I + + GN +GFA
Sbjct: 367 FIRQYCNIYDIGNARIGFA 385
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 37.5 bits (83), Expect = 0.012
Identities = 25/82 (30%), Positives = 34/82 (41%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS + LP + FTI F + YV V T L+ M GP LG +
Sbjct: 307 CSTMNSLPDLVFTIGAEKFPISAPEYVEDVGLDDGTCALA--MYGIDASGFGPSVTLGNI 364
Query: 316 XIGKXYTXFXAGNXXLGFAPPV 251
I + + F GN +GFA +
Sbjct: 365 FIRRYCSVFDVGNARIGFADAI 386
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 37.5 bits (83), Expect = 0.012
Identities = 25/82 (30%), Positives = 34/82 (41%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS + LP + FTI F + YV V T L+ M GP LG +
Sbjct: 307 CSTMNSLPDLVFTIGAEKFPISAPEYVEDVGLDDGTCALA--MYGIDASGFGPSVTLGNI 364
Query: 316 XIGKXYTXFXAGNXXLGFAPPV 251
I + + F GN +GFA +
Sbjct: 365 FIRRYCSVFDVGNARIGFADAI 386
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/82 (28%), Positives = 32/82 (39%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS LP + FTI GN + + YV+ + LS + GP W LG
Sbjct: 392 CSSTATLPDMVFTIGGNSYNVRAVEYVVNLNLPNGQCALS--LFGTAASQSGPAWILGDN 449
Query: 316 XIGKXYTXFXAGNXXLGFAPPV 251
+ F GN +G A +
Sbjct: 450 FLRSYCHVFDFGNSRIGLAKAI 471
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS + P + FTI G + ++ Y+L + G+ C+ ++ GP + LG V
Sbjct: 313 CSTMQTQPDLVFTIGGMQYPVKSIEYILDLG-LGNGRCVLAMLSYS-NTGFGPSYVLGHV 370
Query: 316 XIGKXYTXFXAGNXXLGFA 260
I + + GN +GFA
Sbjct: 371 FIRQFCNVYDIGNARIGFA 389
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 35.1 bits (77), Expect = 0.062
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -2
Query: 496 CSLIPHLPRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXV 317
CS + P + FTI G + ++ Y+L + G+ C+ M GP + G V
Sbjct: 308 CSTMQTQPDLVFTIGGMQYPVKSVEYILDLG-LGNGRCVLA-MFTDSSTGFGPSFGFGNV 365
Query: 316 XIGKXYTXFXAGNXXLGFA 260
+ + F GN +GFA
Sbjct: 366 FLRQYCNIFDVGNARIGFA 384
>U97000-6|AAC47992.2| 134|Caenorhabditis elegans Hypothetical
protein F21F8.2 protein.
Length = 134
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = -2
Query: 475 PRVTFTIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXVXIGKXYT 296
P + I N + +E N YV+ + Q CL L MGP W LG + + +
Sbjct: 61 PNLNIVIGNNIYVVEPNNYVIDINQGDK--CLLAISGLS-GYGMGPTWILGTLFMRQFCH 117
Query: 295 XFXAGNXXLGFA 260
GN +G A
Sbjct: 118 VHDIGNQQIGLA 129
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -2
Query: 460 TIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXVXIGKXYTXFXAG 281
TI N ++++ Y++ G+ CL GP W LG I + + G
Sbjct: 322 TIGTNTYSIQPVNYIV---DAGNGQCLFAAFPFDFGG-FGPSWILGDPFIRQYCNIYDIG 377
Query: 280 NXXLGFAP 257
N +GFAP
Sbjct: 378 NKRMGFAP 385
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = -2
Query: 460 TIAGNDFTLEGNXYVLRVAQXGHTVCLSGXMALXVPKPMGPLWXLGXVXIGKXYTXFXAG 281
TI GN +++E Y+L V G T C+ + GP W G I + + G
Sbjct: 324 TIGGNVYSIEPVNYILDVGM-GDT-CVFAAFSFDFGG-FGPSWIFGDPFIRQYCNIYDIG 380
Query: 280 NXXLGFA 260
+GFA
Sbjct: 381 QQRIGFA 387
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/59 (25%), Positives = 21/59 (35%)
Frame = +3
Query: 387 TVCPNCATRSTXSLPSSVKSFPAMVKVTRGRCGMRLXSTTYCPKAMAVAPTAALRAPTS 563
T P T T + P++ + P T +TT P PT APT+
Sbjct: 140 TTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTT 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,722,137
Number of Sequences: 27780
Number of extensions: 188300
Number of successful extensions: 398
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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