Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_G15
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0399 - 20955319-20955838,20955939-20956201                       28   9.9  
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191...    28   9.9  

>05_04_0399 - 20955319-20955838,20955939-20956201
          Length = 260

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 274 SEPPARHPLLKKPFALCYH 218
           S PPA  P   +P  LCYH
Sbjct: 209 SSPPAETPTSARPVCLCYH 227


>02_01_0285 -
           1913425-1914065,1914094-1914177,1914249-1915140,
           1915205-1915249,1915335-1915870,1915987-1916041
          Length = 750

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 334 HPALLYPPTTSPRDNCTKSKTGDIPS 411
           HPALL PP   P   C  S  G+  S
Sbjct: 590 HPALLLPPPPPPPRPCLSSTVGETSS 615


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,784,919
Number of Sequences: 37544
Number of extensions: 132747
Number of successful extensions: 353
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)