Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_G15
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D63484-1|BAA09771.1|  944|Homo sapiens KIAA0150 protein.               33   1.2  
BC038670-1|AAH38670.1|  948|Homo sapiens zinc finger CCCH-type c...    33   1.2  
BC127015-1|AAI27016.1|  559|Homo sapiens TBC1D24 protein protein.      32   2.1  
BC127014-1|AAI27015.1|  553|Homo sapiens TBC1 domain family, mem...    32   2.1  
BC112389-1|AAI12390.1|  553|Homo sapiens TBC1 domain family, mem...    32   2.1  
AB032997-1|BAA86485.1|  595|Homo sapiens KIAA1171 protein protein.     32   2.1  

>D63484-1|BAA09771.1|  944|Homo sapiens KIAA0150 protein.
          Length = 944

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 337 PALLYPPTTSPRDNCTKSKTGDIPSQCEWKA 429
           P L+  P   PR   T SK G  PS+ +WKA
Sbjct: 347 PQLIADPEPKPRKPATSSKPGSAPSKYKWKA 377


>BC038670-1|AAH38670.1|  948|Homo sapiens zinc finger CCCH-type
           containing 3 protein.
          Length = 948

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 337 PALLYPPTTSPRDNCTKSKTGDIPSQCEWKA 429
           P L+  P   PR   T SK G  PS+ +WKA
Sbjct: 351 PQLIADPEPKPRKPATSSKPGSAPSKYKWKA 381


>BC127015-1|AAI27016.1|  559|Homo sapiens TBC1D24 protein protein.
          Length = 559

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 464 VFRAXTHGXSAQAFHSHCDGISPVLLLVQLSRGEV 360
           +F +  HG S   F+  C+G  P LLL++ ++ EV
Sbjct: 369 LFSSLQHGYSLARFYFQCEGHEPTLLLIKTTQKEV 403


>BC127014-1|AAI27015.1|  553|Homo sapiens TBC1 domain family, member
           24 protein.
          Length = 553

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 464 VFRAXTHGXSAQAFHSHCDGISPVLLLVQLSRGEV 360
           +F +  HG S   F+  C+G  P LLL++ ++ EV
Sbjct: 363 LFSSLQHGYSLARFYFQCEGHEPTLLLIKTTQKEV 397


>BC112389-1|AAI12390.1|  553|Homo sapiens TBC1 domain family, member
           24 protein.
          Length = 553

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 464 VFRAXTHGXSAQAFHSHCDGISPVLLLVQLSRGEV 360
           +F +  HG S   F+  C+G  P LLL++ ++ EV
Sbjct: 363 LFSSLQHGYSLARFYFQCEGHEPTLLLIKTTQKEV 397


>AB032997-1|BAA86485.1|  595|Homo sapiens KIAA1171 protein protein.
          Length = 595

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 464 VFRAXTHGXSAQAFHSHCDGISPVLLLVQLSRGEV 360
           +F +  HG S   F+  C+G  P LLL++ ++ EV
Sbjct: 405 LFSSLQHGYSLARFYFQCEGHEPTLLLIKTTQKEV 439


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,352,823
Number of Sequences: 237096
Number of extensions: 679280
Number of successful extensions: 1648
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)