Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_G15
(800 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 2.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 2.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 2.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 2.5
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 2.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.5
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 7.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 7.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 7.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 7.6
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 268 PPARHPLLKKPFALCYHPDCGPIFG 194
PP P P A +HP P FG
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLNPRFG 171
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 268 PPARHPLLKKPFALCYHPDCGPIFG 194
PP P P A +HP P FG
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLNPRFG 171
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 268 PPARHPLLKKPFALCYHPDCGPIFG 194
PP P P A +HP P FG
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLNPRFG 171
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 268 PPARHPLLKKPFALCYHPDCGPIFG 194
PP P P A +HP P FG
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLNPRFG 171
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 268 PPARHPLLKKPFALCYHPDCGPIFG 194
PP P P A +HP P FG
Sbjct: 151 PPTPFPRFIPPNAYRFHPPLNPRFG 175
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 268 PPARHPLLKKPFALCYHPDCGPIFG 194
PP P P A +HP P FG
Sbjct: 156 PPTPFPRFIPPNAYRFHPPLNPRFG 180
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 268 PPARHPLLKKPFALCYHPDCGPIFG 194
PP P P A +HP P FG
Sbjct: 156 PPTPFPRFIPPNAYRFHPPLNPRFG 180
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 268 PPARHPLLKKPFALCYHPDCGPIFG 194
PP P P A +HP P FG
Sbjct: 156 PPTPFPRFIPPNAYRFHPPLNPRFG 180
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 483 WSPTPXVNDGLKSAF 527
WSP P +N LK +
Sbjct: 201 WSPDPAINRRLKETY 215
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 483 WSPTPXVNDGLKSAF 527
WSP P +N LK +
Sbjct: 201 WSPDPAINRRLKETY 215
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 483 WSPTPXVNDGLKSAF 527
WSP P +N LK +
Sbjct: 201 WSPDPAINRRLKETY 215
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 180 RSAPAPKIGPQSGW*QSAKGFLSSG 254
R P + P+SGW A F ++G
Sbjct: 643 RDIPEEFLRPESGWAIGAMSFSATG 667
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,256
Number of Sequences: 438
Number of extensions: 1347
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -