Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_G14
(806 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr 2... 193 2e-50
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 177 1e-45
SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr 1... 29 1.0
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 27 2.4
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 26 7.2
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 26 7.2
SPAC16E8.03 |gna1|spgna1|glucosamine-phosphate N-acetyltransfera... 26 7.2
>SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 193 bits (471), Expect = 2e-50
Identities = 90/142 (63%), Positives = 108/142 (76%)
Frame = -3
Query: 705 SKIFPXCPLRILLXQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLK 526
SK +P + QDDWSAW ++ T QIVGDDLTVTN KR+ TA++KK N LLLK
Sbjct: 286 SKKYPIVSIEDPFDQDDWSAWTHMKAETDFQIVGDDLTVTNVKRLRTAIDKKCANALLLK 345
Query: 525 VNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSER 346
VNQIGSVTES++A ++ + GWG MVSHRSGET DTFI+ L VG+ GQ+K+GAPCRSER
Sbjct: 346 VNQIGSVTESLNAVRMSYEAGWGVMVSHRSGETADTFISHLTVGIGAGQLKSGAPCRSER 405
Query: 345 LAKYNQILRIEEELGVNAKYAG 280
LAKYN++LRIEEELG YAG
Sbjct: 406 LAKYNELLRIEEELGSEGVYAG 427
Score = 33.1 bits (72), Expect = 0.048
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -2
Query: 745 LSSDKLADVYLDFIKDFPXVSIEDPF 668
L+ +L D+Y++ K +P VSIEDPF
Sbjct: 273 LTYQQLTDLYVELSKKYPIVSIEDPF 298
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 177 bits (432), Expect = 1e-45
Identities = 78/128 (60%), Positives = 106/128 (82%)
Frame = -3
Query: 663 QDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAH 484
++DW A++ ++ +T ++++ DDLTVTN KR++ A+E K N LL+K+NQIGS++E+IDA
Sbjct: 301 EEDWGAFSYMSSKTKVEVIADDLTVTNVKRLSKAIELKCANALLVKINQIGSLSETIDAA 360
Query: 483 LLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEEL 304
+AKK GWG MVSHRSGET+D+FIA L VGL GQ+K+GAPCRSERLAKYN++LRIE+ L
Sbjct: 361 NMAKKAGWGLMVSHRSGETDDSFIAHLAVGLEAGQMKSGAPCRSERLAKYNELLRIEDNL 420
Query: 303 GVNAKYAG 280
G +A YAG
Sbjct: 421 GDSAIYAG 428
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 745 LSSDKLADVYLDFIKDFPXVSIEDPF 668
L KL + Y I+ +P V IEDPF
Sbjct: 274 LDYKKLYEKYSALIEKYPIVFIEDPF 299
>SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 415
Score = 28.7 bits (61), Expect = 1.0
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -3
Query: 573 IATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVG 394
I A+ +K CN +L + + IG VT AH+ K GT++ G T+ ++ L+ G
Sbjct: 40 IDEAIFEKNCNRMLDRASDIG-VT--FRAHVKTHKTIEGTLLQLGDGRTKAVVVSTLMEG 96
Query: 393 LS 388
S
Sbjct: 97 FS 98
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 226 TEFYVFLREFLDRSTEVLP--GVFGVDAKFLFNAQNLVV-LGETLRATRGAGLD 378
+ FY + E RS+EVLP +DAK A+ +++ T A GA LD
Sbjct: 1630 SSFYSLIHESFSRSSEVLPTSSDTNLDAKRAEEAEMIMIETPPTAEANTGAKLD 1683
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 388 HGSD-QDRRPVSLGASRQVQPNSAH*RGTWRQ 296
+GSD RRP LG ++V + +G+WR+
Sbjct: 52 YGSDITPRRPKQLGLPKEVNTSECIDQGSWRK 83
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 394 FVHGS-DQDRRPVSLGASRQVQPN 326
FV GS +Q+RRP+S +QPN
Sbjct: 519 FVQGSGNQNRRPISFPVISNMQPN 542
>SPAC16E8.03 |gna1|spgna1|glucosamine-phosphate
N-acetyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 193 KKVVLTMFVLNKQFNAYHVLQDCSE 119
K +VLT+ L N+Y V+ DCS+
Sbjct: 60 KLMVLTLIKLAFSLNSYKVILDCSD 84
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,013,544
Number of Sequences: 5004
Number of extensions: 59432
Number of successful extensions: 131
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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