Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_G14
(806 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0262 - 1930552-1930632,1931096-1931152,1931236-1931287,193... 208 5e-54
09_03_0117 - 12486672-12486818,12487438-12487488,12487583-124877... 190 1e-48
03_02_0477 - 8770905-8770985,8771164-8771361,8771939-8772025,877... 162 3e-40
10_02_0022 - 4290708-4290788,4291254-4291305,4291396-4291484,429... 148 6e-36
03_02_0365 - 7816966-7817046,7817441-7817492,7817590-7817678,781... 133 1e-31
06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850 30 1.9
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 29 5.8
>06_01_0262 -
1930552-1930632,1931096-1931152,1931236-1931287,
1931373-1931461,1931551-1931601,1931696-1931890,
1932015-1932095,1932205-1932267,1933045-1933119,
1933194-1933352,1933353-1933463,1933536-1933616,
1933721-1933807,1933920-1933967,1934357-1934421,
1935002-1935065,1935220-1935288
Length = 475
Score = 208 bits (507), Expect = 5e-54
Identities = 101/148 (68%), Positives = 115/148 (77%), Gaps = 2/148 (1%)
Frame = -3
Query: 696 FPXCPLRILLXQDDWSAWANLTGRT--PIQIVGDDLTVTNPKRIATAVEKKACNCLLLKV 523
+P + QDDW+ +A LT +QIVGDDL VTNP R+A A+ +K CN LLLKV
Sbjct: 325 YPIVSIEDPFDQDDWATYAKLTDEIGQQVQIVGDDLLVTNPTRVAKAISEKTCNALLLKV 384
Query: 522 NQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERL 343
NQIGSVTESI+A ++K+ GWG M SHRSGETEDTFIADL VGLSTGQIKTGAPCRSERL
Sbjct: 385 NQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERL 444
Query: 342 AKYNQILRIEEELGVNAKYAGKNFRRPV 259
AKYNQ+LRIEEELG A YAG+ FR PV
Sbjct: 445 AKYNQLLRIEEELGDAAVYAGEKFRAPV 472
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 745 LSSDKLADVYLDFIKDFPXVSIEDPF 668
+S D L DVY F+ ++P VSIEDPF
Sbjct: 309 ISGDSLKDVYKSFVSEYPIVSIEDPF 334
>09_03_0117 -
12486672-12486818,12487438-12487488,12487583-12487729,
12488037-12488354,12488450-12488604,12488941-12489248,
12490644-12491038
Length = 506
Score = 190 bits (463), Expect = 1e-48
Identities = 92/127 (72%), Positives = 101/127 (79%)
Frame = -3
Query: 702 KIFPXCPLRILLXQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKV 523
K FP + QDDWS+WA+L IQIVGDDL VTNPKRIA A+ KKACN LLLKV
Sbjct: 334 KDFPIVSIEDPFDQDDWSSWASLQSSVNIQIVGDDLLVTNPKRIAEAIGKKACNALLLKV 393
Query: 522 NQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERL 343
NQIG+VTESI A L +K GWG MVSHRSGETED FIADL VGL++GQIKTGAPCRSERL
Sbjct: 394 NQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLAVGLASGQIKTGAPCRSERL 453
Query: 342 AKYNQIL 322
AKYNQI+
Sbjct: 454 AKYNQIV 460
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -2
Query: 745 LSSDKLADVYLDFIKDFPXVSIEDPF 668
LS+ +L D+Y +F+KDFP VSIEDPF
Sbjct: 320 LSAQRLCDLYKEFVKDFPIVSIEDPF 345
>03_02_0477 -
8770905-8770985,8771164-8771361,8771939-8772025,
8772094-8772179,8772270-8772368,8772431-8772551,
8773251-8773331,8773643-8773723,8773972-8774088,
8774185-8774256,8774621-8775055
Length = 485
Score = 162 bits (393), Expect = 3e-40
Identities = 76/143 (53%), Positives = 99/143 (69%)
Frame = -3
Query: 696 FPXCPLRILLXQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQ 517
+P + +DDW T Q+VGDDL +++P+RI AV + CN L+LK NQ
Sbjct: 337 YPLVSIEQPFDKDDWEHSKKFTTLELCQVVGDDLLMSDPERIKRAVNEYTCNALVLKANQ 396
Query: 516 IGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERLAK 337
+G+VTE+I+ AK WG MVSHRSG+T+D+FIADL VG + GQIK GAPCR E L+K
Sbjct: 397 VGTVTEAIEVVRQAKDAHWGVMVSHRSGDTDDSFIADLAVGAAAGQIKAGAPCRGECLSK 456
Query: 336 YNQILRIEEELGVNAKYAGKNFR 268
YNQ+LRIEEELG + YAG+N+R
Sbjct: 457 YNQLLRIEEELGSDGVYAGENWR 479
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 748 YLSSDKLADVYLDFIKDFPXVSIEDPF 668
+ ++D L ++Y ++P VSIE PF
Sbjct: 320 FKTADDLIEIYSQLCSEYPLVSIEQPF 346
>10_02_0022 -
4290708-4290788,4291254-4291305,4291396-4291484,
4291565-4291615,4291699-4291893,4292010-4292090,
4292190-4292252,4292480-4292554,4292630-4292710,
4292784-4292888,4292977-4293057,4293156-4293242,
4293322-4293369,4293923-4293987,4294109-4294172,
4294828-4294896
Length = 428
Score = 148 bits (358), Expect = 6e-36
Identities = 80/148 (54%), Positives = 96/148 (64%), Gaps = 2/148 (1%)
Frame = -3
Query: 696 FPXCPLRILLXQDDWSAWANLTGRT--PIQIVGDDLTVTNPKRIATAVEKKACNCLLLKV 523
+P + QDDW +A +T +QIVGDDL VTNP R+A A+++K+CN LLLKV
Sbjct: 297 YPIVSIEDPFDQDDWEHYAKMTAEIGEQVQIVGDDLLVTNPTRVAKAIQEKSCNALLLKV 356
Query: 522 NQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERL 343
NQIGSVTESI+A ++K+ GWG M SHRSGETEDTFIADL VGL+T
Sbjct: 357 NQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLAT-------------- 402
Query: 342 AKYNQILRIEEELGVNAKYAGKNFRRPV 259
+LRIEEELG A YAG FR PV
Sbjct: 403 -----LLRIEEELGAAAVYAGAKFRAPV 425
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -2
Query: 745 LSSDKLADVYLDFIKDFPXVSIEDPF 668
+S D L +VY F+ ++P VSIEDPF
Sbjct: 281 ISGDSLKNVYKSFVSEYPIVSIEDPF 306
>03_02_0365 -
7816966-7817046,7817441-7817492,7817590-7817678,
7817762-7817854,7817900-7818094,7818172-7818249,
7818353-7818415,7818806-7818880,7818958-7819038,
7819329-7819409,7819516-7819602,7819682-7819729,
7820317-7820381,7820566-7820629,7821254-7821322
Length = 406
Score = 133 bits (322), Expect = 1e-31
Identities = 82/162 (50%), Positives = 96/162 (59%), Gaps = 16/162 (9%)
Frame = -3
Query: 696 FPXCPLRILLXQDDWSAWANLTGRT--PIQIVGDDLTVTNP--------------KRIAT 565
+P + QDDW +A +T +QIVGDDL VTNP +R+A
Sbjct: 261 YPIVSIEDPFDQDDWVHYAKMTEEIGDQVQIVGDDLLVTNPTFPCWLQYSNQFDLQRVAK 320
Query: 564 AVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLST 385
A++ KACN LLLKVNQIGSVTESI+A ++K+ GWG M SHRSGETEDTFIADL VGLST
Sbjct: 321 AIKDKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLST 380
Query: 384 GQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRPV 259
+LRIEEELG A YAG FR PV
Sbjct: 381 -------------------LLRIEEELGAAAVYAGAKFRAPV 403
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -2
Query: 745 LSSDKLADVYLDFIKDFPXVSIEDPF 668
+S D L +VY F+ ++P VSIEDPF
Sbjct: 245 ISGDSLKNVYKSFVSEYPIVSIEDPF 270
>06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850
Length = 1173
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 536 RQLHAFFSTAVAIRLGFVTVRSSPTI*IGVRPVRLAHADQSSWXKRILNGHXGK 697
+ L F S AV + LG + RS PT+ PV+ ++LN H GK
Sbjct: 590 QDLQLFMSRAVEVLLGDIHDRSDPTLLSHFEPVQERSKYDVQPVYKVLNPHGGK 643
>04_04_1032 -
30259180-30260519,30260650-30260720,30261099-30262118,
30263886-30264121
Length = 888
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -1
Query: 320 ALKRNLASTPNTPGRTSVDRSKNSLKKT*NSVFLSYPHFDSNKKSSIDY 174
ALKR + T G S+DRS +SLK + V S P+ +S SS Y
Sbjct: 515 ALKRPMGKTD---GNISLDRSNSSLKGSLYRVNESNPNMESTGASSHQY 560
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,266,169
Number of Sequences: 37544
Number of extensions: 392193
Number of successful extensions: 811
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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