Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_G14
(806 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-8|CAH10783.1| 465|Caenorhabditis elegans Hypothetical pr... 235 3e-62
Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical pr... 235 3e-62
Z68318-2|CAA92692.1| 434|Caenorhabditis elegans Hypothetical pr... 235 3e-62
Z93389-6|CAB07669.2| 300|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative transp... 28 9.0
U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative transp... 28 9.0
>Z68318-8|CAH10783.1| 465|Caenorhabditis elegans Hypothetical
protein T21B10.2c protein.
Length = 465
Score = 235 bits (575), Expect = 3e-62
Identities = 109/147 (74%), Positives = 121/147 (82%)
Frame = -3
Query: 702 KIFPXCPLRILLXQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKV 523
K +P + QDDW W G T IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKV
Sbjct: 317 KEYPVVSIEDAFDQDDWDNWGKFHGATSIQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKV 376
Query: 522 NQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERL 343
NQIGSVTESI+A L++ NGWG MVSHRSGETEDTFIADLVVGL+TGQIKTGAPCRSERL
Sbjct: 377 NQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTFIADLVVGLATGQIKTGAPCRSERL 436
Query: 342 AKYNQILRIEEELGVNAKYAGKNFRRP 262
AKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 437 AKYNQLLRIEEELGADAVYAGHNFRNP 463
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -2
Query: 778 DXKIPIX-SRXYLSSDKLADVYLDFIKDFPXVSIEDPF 668
D K P S +LS ++L ++Y FIK++P VSIED F
Sbjct: 291 DFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAF 328
>Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical
protein T21B10.2b protein.
Length = 337
Score = 235 bits (575), Expect = 3e-62
Identities = 109/147 (74%), Positives = 121/147 (82%)
Frame = -3
Query: 702 KIFPXCPLRILLXQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKV 523
K +P + QDDW W G T IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKV
Sbjct: 189 KEYPVVSIEDAFDQDDWDNWGKFHGATSIQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKV 248
Query: 522 NQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERL 343
NQIGSVTESI+A L++ NGWG MVSHRSGETEDTFIADLVVGL+TGQIKTGAPCRSERL
Sbjct: 249 NQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTFIADLVVGLATGQIKTGAPCRSERL 308
Query: 342 AKYNQILRIEEELGVNAKYAGKNFRRP 262
AKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 309 AKYNQLLRIEEELGADAVYAGHNFRNP 335
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -2
Query: 778 DXKIPIX-SRXYLSSDKLADVYLDFIKDFPXVSIEDPF 668
D K P S +LS ++L ++Y FIK++P VSIED F
Sbjct: 163 DFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAF 200
>Z68318-2|CAA92692.1| 434|Caenorhabditis elegans Hypothetical
protein T21B10.2a protein.
Length = 434
Score = 235 bits (575), Expect = 3e-62
Identities = 109/147 (74%), Positives = 121/147 (82%)
Frame = -3
Query: 702 KIFPXCPLRILLXQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKV 523
K +P + QDDW W G T IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKV
Sbjct: 286 KEYPVVSIEDAFDQDDWDNWGKFHGATSIQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKV 345
Query: 522 NQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERL 343
NQIGSVTESI+A L++ NGWG MVSHRSGETEDTFIADLVVGL+TGQIKTGAPCRSERL
Sbjct: 346 NQIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTFIADLVVGLATGQIKTGAPCRSERL 405
Query: 342 AKYNQILRIEEELGVNAKYAGKNFRRP 262
AKYNQ+LRIEEELG +A YAG NFR P
Sbjct: 406 AKYNQLLRIEEELGADAVYAGHNFRNP 432
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -2
Query: 778 DXKIPIX-SRXYLSSDKLADVYLDFIKDFPXVSIEDPF 668
D K P S +LS ++L ++Y FIK++P VSIED F
Sbjct: 260 DFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAF 297
>Z93389-6|CAB07669.2| 300|Caenorhabditis elegans Hypothetical
protein T13F3.5 protein.
Length = 300
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -3
Query: 621 PIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKK 469
P+++ L P I +K C CL V+++G+ SI H+L+++
Sbjct: 14 PLEVANQILEKLEP--IYQLTSRKVCKCLKTSVDKLGTHFYSITFHILSRE 62
>Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 747 TCHQIN*-LMSIWTSSKIF-PXCPLRILLXQDDWSAWAN 637
T H +N LM W S + P P ++L D W AW N
Sbjct: 337 TSHIMNKQLMVDWVESAVCDPSMPTEVVLLLDAWPAWKN 375
>U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 747 TCHQIN*-LMSIWTSSKIF-PXCPLRILLXQDDWSAWAN 637
T H +N LM W S + P P ++L D W AW N
Sbjct: 337 TSHIMNKQLMVDWVESAVCDPSMPTEVVLLLDAWPAWKN 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,743,026
Number of Sequences: 27780
Number of extensions: 341991
Number of successful extensions: 775
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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