Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_G04
(839 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 37 0.004
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.007
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.9
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 2.5
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 27 4.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 5.8
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 26 5.8
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 36.7 bits (81), Expect = 0.004
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = -3
Query: 681 VPYPGRKTSALPR*STRCPPSARPCREASSVPPSRYQCPPLTPS---RSTSRTQ-*KRPC 514
+P P TS+ S+ P ++ C ++S+PP+ P+TP+ STS T P
Sbjct: 261 IPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPA 320
Query: 513 RSQLTSPSTGHTQSTSRSTCLCTLRSP 433
+ T S+ STS S T P
Sbjct: 321 STSSTGTSSSPLPSTSTSCTTSTSIPP 347
Score = 33.9 bits (74), Expect = 0.029
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = -3
Query: 678 PYPGRKTSALPR*STRCPPSARPCREASSVPPSRYQCPPLTPS---RSTSRTQ-*KRPCR 511
P P TS+ S+ P ++ C ++S+PP+ P+TP+ STS T P
Sbjct: 316 PPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS 375
Query: 510 SQLTSPSTGHTQSTSRSTCLCTLRSP 433
+ T S+ STS S T P
Sbjct: 376 TSSTGTSSSPLLSTSTSCTTSTSIPP 401
Score = 32.7 bits (71), Expect = 0.067
Identities = 22/89 (24%), Positives = 38/89 (42%)
Frame = -3
Query: 678 PYPGRKTSALPR*STRCPPSARPCREASSVPPSRYQCPPLTPSRSTSRTQ*KRPCRSQLT 499
P P TS+ S+ ++ C ++S+PP+ P+TP+ + + + T
Sbjct: 370 PPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTT 429
Query: 498 SPSTGHTQSTSRSTCLCTLRSPYRTQLRY 412
S S +T + ST L T T + Y
Sbjct: 430 STSVPYTSTPVTSTPLATTNCTTSTSVPY 458
Score = 32.3 bits (70), Expect = 0.088
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = -3
Query: 681 VPYPGRKTSALPR*STRCPPSARPCREASSVPP----SRYQCP--PLTPSRSTSRTQ*KR 520
+P P TS+ S P ++ C ++S+PP S P P P STS T
Sbjct: 148 IPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPI 207
Query: 519 PCRSQLTSPSTGHTQSTSRSTCLCTLRSP 433
P S ++ + T+ ++C + P
Sbjct: 208 PPTSTSSTDTNSSPLPTTSTSCTTSTSIP 236
Score = 27.9 bits (59), Expect = 1.9
Identities = 24/90 (26%), Positives = 34/90 (37%)
Frame = -3
Query: 681 VPYPGRKTSALPR*STRCPPSARPCREASSVPPSRYQCPPLTPSRSTSRTQ*KRPCRSQL 502
+PY ++ P +T C S ++ V S Y TP ST T +
Sbjct: 479 IPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVT-----TTNCT 533
Query: 501 TSPSTGHTQSTSRSTCLCTLRSPYRTQLRY 412
TS S +T + ST L T T + Y
Sbjct: 534 TSTSVLYTSTPVTSTPLATTNCTTSTSVPY 563
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.9 bits (79), Expect = 0.007
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -1
Query: 617 PVHVEKPVPYPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 471
P PVP P G P+P +A PVP+ A PS R ++PSP
Sbjct: 1212 PPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEA-PSVSTPRSSVPSP 1259
Score = 31.5 bits (68), Expect = 0.15
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = -3
Query: 684 PVPYPGRKTSALPR*STRCPPSARPCREASSVPPSRYQCPP----LTPSRSTSRTQ*KRP 517
PVP P +P + + PP P EA SV R P +PS ++S P
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAP 1277
Query: 516 CRSQLT-SPSTGHTQSTSRST 457
R+ ++ S S TS S+
Sbjct: 1278 ARTSVSRSKSKAERHETSTSS 1298
Score = 31.1 bits (67), Expect = 0.20
Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Frame = -3
Query: 816 PYPXXXPXMAXSYPXYXXVXVPVXAMGQXXPRAFXKPGXTPV-EKPVPYPGRKTSALPR* 640
P P P + V VP A P P P PVP P +P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 639 STRCPPSARPCREASSVPPSRYQCPPL 559
S+ PP +P VPP + PP+
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPS-EAPPV 1200
Score = 28.7 bits (61), Expect = 1.1
Identities = 25/91 (27%), Positives = 29/91 (31%), Gaps = 5/91 (5%)
Frame = -3
Query: 816 PYPXXXPXMAXSYPXYXXVXVPVXAMGQXXPRAFXKPGXTPVEKP-----VPYPGRKTSA 652
P P P + S PV A P G PV P VP P
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Query: 651 LPR*STRCPPSARPCREASSVPPSRYQCPPL 559
+P+ S PP P A VP PP+
Sbjct: 1104 VPKPSVAVPPVPAP-SGAPPVPKPSVAAPPV 1133
Score = 28.3 bits (60), Expect = 1.4
Identities = 24/86 (27%), Positives = 29/86 (33%)
Frame = -3
Query: 810 PXXXPXMAXSYPXYXXVXVPVXAMGQXXPRAFXKPGXTPVEKPVPYPGRKTSALPR*STR 631
P P A P PV A P P + PVP P +P+ +
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPP----VPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Query: 630 CPPSARPCREASSVPPSRYQCPPLTP 553
PP P EA VP PP+ P
Sbjct: 1188 VPP-VPPPSEAPPVPKPSVGVPPVPP 1212
Score = 27.1 bits (57), Expect = 3.3
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = -3
Query: 816 PYPXXXPXMAXSYPXYXXVXVPVXAMGQXXPRAFXKPGXTPVE--KPVPYPGRKTSALPR 643
P P P + V P A P P P PVP P +P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 642 *STRCPPSARPCREASSVPPSRYQCPPLTPS 550
S PP +P VPP P TPS
Sbjct: 1194 PS-EAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Score = 25.8 bits (54), Expect = 7.6
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 629 ARPVPVHVEKPVPYPRQGTSARPL-PRREAHPVPSRKGRAVPS*HPRRQAIPSP 471
A PVP P P+ P+ P EA PVP + VP P A P P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP-KPSVGVPPVPPPSTAPPVP 1220
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = -3
Query: 735 QXXPRAFXKPGXTPVEKPVPYPGRKTSALPR*STRCPPSARPCREASSVPPSRYQCPPLT 556
Q P + + P P PGR ALP S P S+PPS P L
Sbjct: 375 QPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPS--APPSLP 432
Query: 555 PSRSTS 538
PS S
Sbjct: 433 PSAPPS 438
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.9 bits (59), Expect = 1.9
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -3
Query: 624 PSARPCREASSVPPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCT 445
PS+ P A+S + PLT ST+ T S ++S ++ STS ST L +
Sbjct: 287 PSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTS-STPLSS 345
Query: 444 LRSPYRT 424
+ S T
Sbjct: 346 VNSTTAT 352
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 623 PVPVHVEKPVPYPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIP 477
P PV +KP+P P + +PLP R P P H +R+A P
Sbjct: 42 PAPVS-KKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPPTH-QREASP 88
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 648 PR*STRCPPSAR-PC-REASSVPPSRYQCPPLTPSRSTSRTQ 529
P+ ST P SA P +SVP + + P T + STS TQ
Sbjct: 75 PKTSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTSTTQ 116
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 521 LFYWVRDVLLDGVRGGHWYLDGGTELAS 604
+F +V L+ VR GHW L LAS
Sbjct: 624 MFSFVEGALVKAVRSGHWVLLDEINLAS 651
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 518 GLFYWVRDVLLDGVRGGHWYLDGGTELAS 604
G F W LL V GHW++ L S
Sbjct: 2012 GRFEWFDGYLLKAVEEGHWFVLDNANLCS 2040
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 5.8
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Frame = -3
Query: 744 AMGQXXPRAFXKPGXTPVEKPVPYPGRKTSALPR*STRCPPSAR-PCREASSVPPSRYQC 568
A G R K + P P S L R T PP P +S PP +
Sbjct: 106 AGGMPKLRHIGKSSASAAPPSAPAPPTPQSEL-RPPTSAPPRPSIPPPSPASAPPIPSKA 164
Query: 567 PPLTPSRSTSRTQ*KRPCRSQLTSPS 490
PP+ PS Q P +S ++PS
Sbjct: 165 PPI-PSSLPPPAQPAAPVKSPPSAPS 189
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -3
Query: 708 PGXTPVEKPVPYPGRKTSALP-R*STRCPPSARPCREASSVP 586
P P P P PGR S P R T P S E+S P
Sbjct: 585 PSVIPPRVPTPVPGRTLSPKPTRIPTPIPSSLNVSLESSKKP 626
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,488,806
Number of Sequences: 5004
Number of extensions: 41539
Number of successful extensions: 157
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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