Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_G04
         (839 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    34   0.005
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       28   0.41 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.2  
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    26   1.6  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        24   6.6  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    24   6.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   8.7  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 34.3 bits (75), Expect = 0.005
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -2

Query: 538 PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
           PYP++  V  P+ IP+ +  P  IEK VP  +EK
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEK 230



 Score = 34.3 bits (75), Expect = 0.005
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -2

Query: 547 KHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
           K IP  +EK VP+ V    ++PYP+ +EK  PV + K
Sbjct: 214 KVIPKVIEKPVPYTV----EKPYPIEVEKPFPVEVLK 246



 Score = 33.1 bits (72), Expect = 0.011
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = -2

Query: 550 EKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 437
           EK +PY VEK  P+P  I V++P+PV + K   V + K
Sbjct: 221 EKPVPYTVEK--PYP--IEVEKPFPVEVLKKFEVPVPK 254



 Score = 32.7 bits (71), Expect = 0.014
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 541 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 443
           +P+PV  AVP  V + + +PYP+ +    P+ I
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKI 210



 Score = 32.3 bits (70), Expect = 0.019
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 8/36 (22%)
 Frame = -2

Query: 538 PYPVEKAVPFPV------NIPVDRPYPVHIE--KHV 455
           PYP+E   PFPV       +PV +PYPV +   KH+
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTVYKHI 266



 Score = 25.0 bits (52), Expect = 2.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 547 KHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVP 452
           K +P PV + V  PV  PV    P +++ ++P
Sbjct: 164 KTVPVPVFQKVGVPVPHPVPIAVPHYVKVYIP 195



 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = -2

Query: 523 KAVPFPV----NIPVDRPYPVHIEKHVPVHI 443
           K VP PV     +PV  P P+ +  +V V+I
Sbjct: 164 KTVPVPVFQKVGVPVPHPVPIAVPHYVKVYI 194



 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 626 RPVPVHVEKPVPYPRQGTSARPLPRREAHPVP 531
           +P P+ VEKP P         P+P+   +PVP
Sbjct: 230 KPYPIEVEKPFPVEVLKKFEVPVPK--PYPVP 259



 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 620 VPVHVEKPVPYPRQGTSARPLPRREAHPVP 531
           +P  +EKPVPY    T  +P P     P P
Sbjct: 216 IPKVIEKPVPY----TVEKPYPIEVEKPFP 241



 Score = 23.4 bits (48), Expect = 8.7
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -1

Query: 626 RPVPVHVEKPVPYPRQGTSARPLPRREAHPVPSRKGRAVP 507
           +PVP  VEK  PYP +     P+   +   VP  K   VP
Sbjct: 222 KPVPYTVEK--PYPIEVEKPFPVEVLKKFEVPVPKPYPVP 259


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 27.9 bits (59), Expect = 0.41
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 289 HIKDEACVTNRIVVGFQILTYSTSLDRTH 203
           HI+ + C    IV GF +L YST   +TH
Sbjct: 15  HIRTDLCT--HIVYGFAVLDYSTLTIKTH 41


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 532 PVEKAVPFPVNIPVDRPYPVHI 467
           PV   VP+P+ IP+  P PV I
Sbjct: 625 PVTILVPYPIIIPLPLPIPVPI 646



 Score = 23.8 bits (49), Expect = 6.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 541 IPYPVEKAVPFPVNIPV 491
           +PYP+   +P P+ +P+
Sbjct: 630 VPYPIIIPLPLPIPVPI 646


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 615 RPCREASSVPPSRYQCPPLT 556
           +P  E     P RYQCP LT
Sbjct: 41  KPILEEGQCCPKRYQCPELT 60


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 520 AVPFPVNIPVDRPY 479
           ++PFP N  V+RP+
Sbjct: 206 SIPFPTNATVERPF 219


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 609 CREASSVPPSRYQCPPLTPSRSTSR 535
           C+E     P  Y CP   P +S+ R
Sbjct: 68  CKETREPLPYMYACPGTEPCQSSDR 92


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 567 PPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTS 466
           PPL   +     +  RP +S   SPS G  QS S
Sbjct: 427 PPLHALKDFINKEPPRPGQSPTQSPSPGSQQSLS 460


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,125
Number of Sequences: 2352
Number of extensions: 11901
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)