Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_G01
(776 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0017 + 18937774-18937864,18938505-18940945 142 3e-34
04_01_0103 + 1082077-1082167,1083037-1085477 140 1e-33
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 118 4e-27
01_06_0662 + 30987187-30987277,30987825-30990214 118 7e-27
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 100 3e-21
03_05_0511 + 25056018-25059107 79 3e-15
02_04_0148 - 20198407-20201424 66 4e-11
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 39 0.005
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 38 0.007
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 37 0.021
01_04_0109 + 16112581-16112934 32 0.44
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 31 1.3
04_01_0330 - 4369326-4370852 29 5.4
09_06_0142 - 21107878-21109104 28 7.2
08_02_0122 + 12805419-12805438,12805842-12805989,12806155-128063... 28 9.5
01_04_0120 + 16242220-16242483,16242538-16243424,16244604-162452... 28 9.5
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 142 bits (344), Expect = 3e-34
Identities = 65/109 (59%), Positives = 80/109 (73%)
Frame = -1
Query: 542 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 363
P L V+ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF+
Sbjct: 723 PRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFS 782
Query: 362 ADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKE 216
+ LR+ T GQAFPQCVFDHW ++ DP E S+ +VQ+ RKRKGLKE
Sbjct: 783 SQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRKGLKE 831
Score = 122 bits (294), Expect = 3e-28
Identities = 55/91 (60%), Positives = 68/91 (74%)
Frame = -3
Query: 756 KGVQYLNEXRTLLGLDXQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHGGGGQIIPTTR 577
KGVQYLNE + + QW +KEG +AEEN+RG+ F + DV LH DAIH GGGQ+IPT R
Sbjct: 652 KGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTAR 711
Query: 576 RCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 484
R +YA LTA+PRL+EPVYL EIQ P ++ G
Sbjct: 712 RVIYASQLTAKPRLLEPVYLVEIQAPENALG 742
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 140 bits (338), Expect = 1e-33
Identities = 64/109 (58%), Positives = 79/109 (72%)
Frame = -1
Query: 542 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 363
P L V+ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF+
Sbjct: 723 PRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFS 782
Query: 362 ADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKE 216
+ LR+ T GQAFPQCVFDHW ++ DP E S+ +V + RKRKGLKE
Sbjct: 783 SQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLKE 831
Score = 122 bits (294), Expect = 3e-28
Identities = 55/91 (60%), Positives = 68/91 (74%)
Frame = -3
Query: 756 KGVQYLNEXRTLLGLDXQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHGGGGQIIPTTR 577
KGVQYLNE + + QW +KEG +AEEN+RG+ F + DV LH DAIH GGGQ+IPT R
Sbjct: 652 KGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTAR 711
Query: 576 RCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 484
R +YA LTA+PRL+EPVYL EIQ P ++ G
Sbjct: 712 RVIYASQLTAKPRLLEPVYLVEIQAPENALG 742
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 118 bits (285), Expect = 4e-27
Identities = 55/110 (50%), Positives = 71/110 (64%)
Frame = -1
Query: 545 SPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 366
SP L V VP+ AVG +YGVLN R G + EES+ GTP+ ++ YLPV +SF F
Sbjct: 732 SPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLRFYLPVAKSFDF 791
Query: 365 TADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKE 216
T LR+ T GQAFPQC+F HWQ + DP + S+ V+ + RKRKGLK+
Sbjct: 792 TEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLKD 841
Score = 117 bits (282), Expect = 9e-27
Identities = 53/91 (58%), Positives = 68/91 (74%)
Frame = -3
Query: 756 KGVQYLNEXRTLLGLDXQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHGGGGQIIPTTR 577
KGVQYL+E + + QW +KEG +AEEN+RGV F + DVTLH+D+IH GGGQ+IPT R
Sbjct: 662 KGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSDSIHRGGGQLIPTAR 721
Query: 576 RCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 484
R +YA LTA PRLMEP+Y +IQ P ++ G
Sbjct: 722 RAMYAAQLTASPRLMEPMYQVDIQVPKTAVG 752
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 118 bits (283), Expect = 7e-27
Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
Frame = -3
Query: 756 KGVQYLNEXRTLLGLDXQWXAKEGVMAEENLRG--VRFNIYDVTLHTDAIHGGGGQIIPT 583
KGVQYLNE + + QW +KEG +AEEN+RG + F + DV LH+DAIH GGGQIIPT
Sbjct: 648 KGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAIHRGGGQIIPT 707
Query: 582 TRRCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 484
RR +YA LTA+PRL+EPVYL EIQ P ++ G
Sbjct: 708 ARRVIYAAQLTAKPRLLEPVYLVEIQAPENALG 740
Score = 117 bits (282), Expect = 9e-27
Identities = 54/93 (58%), Positives = 67/93 (72%)
Frame = -1
Query: 542 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 363
P L V+ PE A+GGIY VLN++RGHVFEE Q GTP++ +KAYLPV ESFGFT
Sbjct: 721 PRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFT 780
Query: 362 ADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSK 264
+ LR+ T GQAFP VFDHW++L DP EP ++
Sbjct: 781 STLRAATSGQAFPLFVFDHWEMLSVDPLEPGTR 813
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 99.5 bits (237), Expect = 3e-21
Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 12/124 (9%)
Frame = -1
Query: 551 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 372
+ +P L +++ P V IY VL+RRRGHV + GTP+++VKA+LPV ESF
Sbjct: 846 MANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLPVIESF 905
Query: 371 GFTADLRSNTGGQAFPQCVFDHWQVLPGD---------PCEP---QSKPYNVVQETRKRK 228
GF DLR +T GQAF VFDHW ++PGD P EP Q + +TR+RK
Sbjct: 906 GFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVKTRRRK 965
Query: 227 GLKE 216
G+ E
Sbjct: 966 GMSE 969
Score = 84.6 bits (200), Expect = 8e-17
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = -3
Query: 741 LNEXRTLLGLDXQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHGGGGQIIPTTRRCLYA 562
LN + + QW A+EG + +E +R V+F I + + + +H GGGQIIPT RR +Y+
Sbjct: 783 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVVYS 842
Query: 561 CLLTAQPRLMEPVYLCEIQCP 499
L A PRLMEPVY EIQ P
Sbjct: 843 AFLMANPRLMEPVYYIEIQTP 863
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 79.4 bits (187), Expect = 3e-15
Identities = 39/100 (39%), Positives = 53/100 (53%)
Frame = -1
Query: 581 LEDACTHVC*LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIV 402
+++AC P L F + + P +G Y VL+R+R V +E GT +F V
Sbjct: 873 VKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEGTSLFTV 932
Query: 401 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 282
AYLPV ES GF+ +LRS T G A V HW+ +P DP
Sbjct: 933 HAYLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 639 DVTLHTDAIHGGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 484
D H++ + GQ+I + ++ +PRL+E +Y CE+ P G
Sbjct: 854 DAANHSEQYNIFSGQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLG 905
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 65.7 bits (153), Expect = 4e-11
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = -1
Query: 581 LEDACTHVC*LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIV 402
+ +AC P L F + + P +G +Y VL R V +E GT +F V
Sbjct: 849 VREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEGTSLFTV 908
Query: 401 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 282
AYL V ES F+ LR+ T G A F HW+ +P DP
Sbjct: 909 HAYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -3
Query: 600 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 484
GQII R A +L ++PRL+EP+Y CE+ P G
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLG 881
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = -1
Query: 515 VKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 336
V+ PE +G + G LN RRG V G + +V A++P+ E F + + LR T G
Sbjct: 658 VEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAEMFQYVSTLRGMTKG 716
Query: 335 QAFPQCVFDHWQVLP 291
+A + V+P
Sbjct: 717 RASYTMQLAKFDVVP 731
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -1
Query: 542 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 363
PV+ + V+ VP G + G +N+R+G + Q +V ++P+N FG++
Sbjct: 671 PVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLNNMFGYS 728
Query: 362 ADLRSNTGGQ 333
LRS T G+
Sbjct: 729 TALRSMTQGK 738
>11_06_0768 +
27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -2
Query: 379 SRSVLLPICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGKD 224
S S +P +P P D PS+ +T G S+ +N SP+ +Y K G D
Sbjct: 19 STSARVPGVIPKPIDLPSQRGTATQGDKSMPPASNAWGSPSVMYPKNGGGSD 70
>01_04_0109 + 16112581-16112934
Length = 117
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -2
Query: 382 MSRSVLLP--ICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGK 227
M+ VL P + +P+PA R R+ +T R++ +++ R PTT +R +G+
Sbjct: 1 MATEVLRPHNVLLPSPAQRRIRATAATHQRTANNHQSDARTKPTTAGSRRRQGR 54
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = -1
Query: 524 YIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSN 345
Y VPE +G + +L +RRG + + ++K +P G + +
Sbjct: 506 YEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLIGLRNAVLTA 565
Query: 344 TGGQAFPQCVFDHWQVLPGD 285
+ G A +FD + GD
Sbjct: 566 SRGTAILNTIFDSYGPWAGD 585
>04_01_0330 - 4369326-4370852
Length = 508
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 584 VGMIWPPPPWMASVWSVTS 640
+G IWPPP W S TS
Sbjct: 487 IGKIWPPPVWFKRCTSATS 505
>09_06_0142 - 21107878-21109104
Length = 408
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 258 VGLALRFARVSREDLPMVEYALREGLS-AGVGTQIGSKTER 377
V L L++ E LP++ A REG++ AGV +GS R
Sbjct: 171 VDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASR 211
>08_02_0122 +
12805419-12805438,12805842-12805989,12806155-12806380,
12806501-12807117
Length = 336
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -1
Query: 506 SVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKA-YLPVNESFGFTADLRSNTGGQA 330
++ E VGG Y R ES + TP+ + +A + P ++ G+T LR + G
Sbjct: 188 TIEEFRVGGAYRE-TRNMTRNERESSSSSTPVQMYEAGWAPAGDAPGWTQALRHSIGVLT 246
Query: 329 FPQCVFDHWQ 300
+ D W+
Sbjct: 247 WASASEDRWR 256
>01_04_0120 +
16242220-16242483,16242538-16243424,16244604-16245264,
16245582-16245943,16246071-16246140,16246666-16246740
Length = 772
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 527 LYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKA-YLPVNESFGFTADLR 351
L I ++ E GG Y R +ES + TPM + +A + P+ ++ G+T R
Sbjct: 598 LIITFAMTIEESRAGGTYRE-TRNMTRNEQESSSSSTPMQMYEAGWAPIGDAPGWTQAPR 656
Query: 350 SNTGGQAFPQCVFDHW 303
+ G + D W
Sbjct: 657 HSIGVSTWSSTSEDRW 672
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,659,956
Number of Sequences: 37544
Number of extensions: 493182
Number of successful extensions: 1352
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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