Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_G01
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 192 2e-49
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 192 2e-49
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 95 4e-20
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 95 4e-20
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 30 1.6
U70844-3|AAB09093.2| 209|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 29 4.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 192 bits (469), Expect = 2e-49
Identities = 88/112 (78%), Positives = 94/112 (83%)
Frame = -1
Query: 542 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 363
P L V+ PE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFT
Sbjct: 732 PRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFT 791
Query: 362 ADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 207
ADLRSNTGGQAFPQCVFDHWQVLPGDP E +KP +V +TRKRKGLKEG+P
Sbjct: 792 ADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
Score = 134 bits (325), Expect = 5e-32
Identities = 59/92 (64%), Positives = 74/92 (80%)
Frame = -3
Query: 759 SKGVQYLNEXRTLLGLDXQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHGGGGQIIPTT 580
+KGVQYLNE + + QW +EGV+++EN+RGVRFN++DVTLH DAIH GGGQIIPT
Sbjct: 660 TKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTA 719
Query: 579 RRCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 484
RR YA +LTA+PRL+EPVYL EIQCP ++ G
Sbjct: 720 RRVFYASVLTAEPRLLEPVYLVEIQCPEAAVG 751
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 192 bits (469), Expect = 2e-49
Identities = 88/112 (78%), Positives = 94/112 (83%)
Frame = -1
Query: 542 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 363
P L V+ PE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFT
Sbjct: 732 PRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFT 791
Query: 362 ADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 207
ADLRSNTGGQAFPQCVFDHWQVLPGDP E +KP +V +TRKRKGLKEG+P
Sbjct: 792 ADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
Score = 134 bits (325), Expect = 5e-32
Identities = 59/92 (64%), Positives = 74/92 (80%)
Frame = -3
Query: 759 SKGVQYLNEXRTLLGLDXQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHGGGGQIIPTT 580
+KGVQYLNE + + QW +EGV+++EN+RGVRFN++DVTLH DAIH GGGQIIPT
Sbjct: 660 TKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTA 719
Query: 579 RRCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 484
RR YA +LTA+PRL+EPVYL EIQCP ++ G
Sbjct: 720 RRVFYASVLTAEPRLLEPVYLVEIQCPEAAVG 751
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 95.5 bits (227), Expect = 4e-20
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Frame = -1
Query: 551 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 372
+ +P L Y V+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SF
Sbjct: 826 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 885
Query: 371 GFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEP---------QSKPY---NVVQETRKRK 228
GF DLR +T GQAF F HWQ++PGDP + Q P+ + +TR+RK
Sbjct: 886 GFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRK 945
Query: 227 GLKE 216
GL E
Sbjct: 946 GLSE 949
Score = 81.4 bits (192), Expect = 7e-16
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = -3
Query: 741 LNEXRTLLGLDXQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHGGGGQIIPTTRRCLYA 562
L+ R L QW +EG + EE +R V+F + D + T+ ++ GGGQ+IPT RRC Y+
Sbjct: 763 LSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYS 822
Query: 561 CLLTAQPRLMEPVYLCEIQCP 499
L A PRLMEP Y E+ P
Sbjct: 823 AFLMATPRLMEPYYTVEVVAP 843
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 95.5 bits (227), Expect = 4e-20
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Frame = -1
Query: 551 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 372
+ +P L Y V+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SF
Sbjct: 701 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 760
Query: 371 GFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEP---------QSKPY---NVVQETRKRK 228
GF DLR +T GQAF F HWQ++PGDP + Q P+ + +TR+RK
Sbjct: 761 GFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRK 820
Query: 227 GLKE 216
GL E
Sbjct: 821 GLSE 824
Score = 81.4 bits (192), Expect = 7e-16
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = -3
Query: 741 LNEXRTLLGLDXQWXAKEGVMAEENLRGVRFNIYDVTLHTDAIHGGGGQIIPTTRRCLYA 562
L+ R L QW +EG + EE +R V+F + D + T+ ++ GGGQ+IPT RRC Y+
Sbjct: 638 LSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYS 697
Query: 561 CLLTAQPRLMEPVYLCEIQCP 499
L A PRLMEP Y E+ P
Sbjct: 698 AFLMATPRLMEPYYTVEVVAP 718
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/70 (41%), Positives = 39/70 (55%)
Frame = -1
Query: 491 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 312
A+G ++ VL++R+ V E T +F V + +PV ESF F LR T G A Q F
Sbjct: 769 ALGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQF 828
Query: 311 DHWQVLPGDP 282
HWQV+ DP
Sbjct: 829 SHWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Frame = -1
Query: 446 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 282
V E T +F V + +PV ESF F LR T G A Q F HWQV+ DP
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -1
Query: 515 VKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 336
V+ +VP G + L +R + G I +A P+++ FG+T++LRS T G
Sbjct: 649 VEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEG 706
Query: 335 Q 333
+
Sbjct: 707 K 707
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 58 LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVVH 180
+L+ LR+C+ C + TC K FP ++V L+ ++VV+
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVVN 329
>U70844-3|AAB09093.2| 209|Caenorhabditis elegans Hypothetical
protein ZK154.1 protein.
Length = 209
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 522 YLCEIQCP*SSCGWYLRCTEQTSWSRFRRVPGGRYTYV 409
Y C +QC W +C E TS+S FR GR T+V
Sbjct: 42 YTCAVQCE-----WRKQCNEHTSFSTFR----GRRTFV 70
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 291 REDLPMVEYALREGLSAGVGTQIGSKTERLID 386
+ED+ +EY + E ++ +GTQ+ KT +D
Sbjct: 232 QEDVTRIEYLIHEYQNSDIGTQMLKKTRTAVD 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,007,306
Number of Sequences: 27780
Number of extensions: 407919
Number of successful extensions: 1010
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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