Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F24
         (966 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   6.2  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +1

Query: 85  TFYITTYTCISLHT 126
           +FYIT+YT +S+++
Sbjct: 59  SFYITSYTLLSVYS 72


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 140 FYLCHVC 120
           FY+CHVC
Sbjct: 647 FYICHVC 653



 Score = 22.2 bits (45), Expect = 6.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 140  FYLCHVC 120
            FY+CHVC
Sbjct: 1010 FYICHVC 1016


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +1

Query: 85  TFYITTYTCISLHT 126
           +FYIT+YT +S+++
Sbjct: 59  SFYITSYTLLSVYS 72


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 140 FYLCHVC 120
           FY+CHVC
Sbjct: 291 FYICHVC 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,848
Number of Sequences: 336
Number of extensions: 1829
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27306312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)