Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F21
         (823 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0191 - 32228642-32228949,32229028-32230567                       36   0.051
11_04_0475 - 18176578-18177252,18180101-18180664                       32   0.63 
02_04_0541 - 23757643-23757912                                         30   2.6  
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223...    29   4.5  
06_03_0885 + 25677243-25678157,25681064-25681705                       29   4.5  
08_01_0107 - 789217-789984,790070-790219,790303-790890,790968-79...    29   5.9  
06_01_0808 + 6097751-6097913,6098298-6098731                           28   7.8  

>03_06_0191 - 32228642-32228949,32229028-32230567
          Length = 615

 Score = 35.5 bits (78), Expect = 0.051
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
 Frame = +3

Query: 126 PASPHATPDDVTPNTALAQPASLSCRIKGP-PLSPSQVSCGVSRSPXAHLRAVVEPVEQV 302
           P SPHA     TP    A  ASL+   +   P +   +   +SR+  A L  ++     +
Sbjct: 28  PPSPHAAAPTSTPQAFHAHLASLAAPSRAAHPATLRSILAALSRARAAGL-PLLPATRVL 86

Query: 303 AVLRILRQALLSGELAHFDLLQNIGQAFPRP 395
           A   +LR   L   LAHF L+ +   A P P
Sbjct: 87  AASALLRHGRLPDALAHFGLVPD-SAALPAP 116


>11_04_0475 - 18176578-18177252,18180101-18180664
          Length = 412

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +3

Query: 120 PAPASPHATPDDVTPNTALAQPASLSCRIKGPPLSPSQVSCGVSR 254
           PAP +P   P          +P  L CR    PLSP   + G  R
Sbjct: 33  PAPPAPAPAPPASASKVLEQEPEELPCRAADSPLSPQPSAAGTPR 77


>02_04_0541 - 23757643-23757912
          Length = 89

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 780 SSPSWRCWVSGXAQRRPSGCXAGRCSPRGTSSXAAHC 670
           ++ SW  W +  A RRP    AGR S    S+ AAHC
Sbjct: 18  AAASW-LWTNAGAARRPPSSAAGR-SCLAASTVAAHC 52


>11_01_0298 -
           2231063-2232015,2232124-2232798,2232918-2232946,
           2233053-2233513,2233593-2233717,2233801-2234098,
           2235004-2236234,2236562-2237233,2237329-2238539
          Length = 1884

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +3

Query: 123 APASPHATPDDVTPNTALAQPASLSCRIKGPPLS--PSQVSCGVSRSPXAHLRAVVEPVE 296
           A A+  AT DD          AS S  ++ PP S  P+  + G       H RA   PV 
Sbjct: 14  AAAAAPATADDARETEIAGGIASASAAVEDPPASAPPASEAAGEGVIAVEHERAAAHPVS 73

Query: 297 Q 299
           +
Sbjct: 74  E 74


>06_03_0885 + 25677243-25678157,25681064-25681705
          Length = 518

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +3

Query: 252 RSPXAHLRAVVEPVEQVAVLRILRQALLSG-ELAHFDLLQNIGQAFPRPQVAPAQCQGSC 428
           R+P A  +A  E  +  A   ++ +A LS     H  + + +    P P + P +C+  C
Sbjct: 328 RNPMAMKKATAEVRQAFAAAGVVSEAALSELRYLHLVIKETLRLHPPGPLLLPRECREQC 387

Query: 429 WVNSLTVHTGVQ 464
            V    V  G Q
Sbjct: 388 KVLGYDVPRGTQ 399


>08_01_0107 -
           789217-789984,790070-790219,790303-790890,790968-791093
          Length = 543

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -2

Query: 306 PPPARRVRQQHADVLXETATHRTTLARVTAAVP*SCTRARQAA 178
           PPP ++ +Q  A  + E   H   LA  TAA   +     QAA
Sbjct: 66  PPPQQQQQQSRAAAVTEEQRHAIALAVATAATAEAAVATAQAA 108


>06_01_0808 + 6097751-6097913,6098298-6098731
          Length = 198

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 120 PAPASPHATPDDVTPNTALAQPASLSCRIKGPPLSPSQV 236
           PAP +P  TP   TP+T  A PAS        P +P+ V
Sbjct: 127 PAPKAPSTTP--TTPSTTPATPASPGTSSGLTPTTPATV 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,410,577
Number of Sequences: 37544
Number of extensions: 433095
Number of successful extensions: 1615
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)